RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PLOD1Q02809 727 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 INTS5Q6P9B9 1019 aaKnown RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SLC26A11Q86WA9 606 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 HS6ST3Q8IZP7 471 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 RTFDC1Q9BY42 306 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 UBE2OQ9C0C9 1292 aaKnown RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SLC7A5P2Q9GIP4 190 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 EFCAB1Q9HAE3 211 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SOX13Q9UN79 622 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 C17orf102A2RUQ5 167 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 C2orf81A6NN90 581 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 O00370 1275 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 VWA5AO00534 786 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 UBTFL6P0CB48 400 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 RANBP1P43487 201 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SLFN11Q7Z7L1 901 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 TUBGCP3Q96CW5 907 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 PAFAH2Q99487 392 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SPATA16Q9BXB7 569 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 ATP11BQ9Y2G3 1177 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 E9PCH4 1651 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 CLK1P49759 484 aaKnown RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 AMHR2Q16671 573 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 C11orf63Q6NUN7 778 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 BLOC1S5Q8TDH9 187 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SHCBP1LQ9BZQ2 653 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 CYP3A43Q9HB55 503 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 MAP3K6O95382 1288 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 CNTFP26441 200 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 AARS2Q5JTZ9 985 aaKnown RBP16.61■□□□□ 0.25
COL2A1-202ENST00000380518 DEPDC1Q5TB30 811 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 CAVIN3Q969G5 261 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 PHF21AQ96BD5 680 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 WWOXQ9NZC7 414 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SPATA31A5Q5VU36 1347 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 SPATA31A7Q8IWB4 1347 aa16.61■□□□□ 0.25
COL2A1-202ENST00000380518 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 ZNF177Q13360 481 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 ORC1Q13415 861 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 PKN1Q16512 942 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 DTNAQ9Y4J8 743 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 SKAP2O75563 359 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 SLC26A2P50443 739 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 BACE1P56817 501 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 RCN1Q15293 331 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 TIGD7Q6NT04 549 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 EXOSC4Q9NPD3 245 aaKnown RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 CISHQ9NSE2 258 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 APPL1Q9UKG1 709 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 LZTS1Q9Y250 596 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 ENO4A6NNW6 628 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 DPEP1P16444 411 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 SERPINB3P29508 390 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 BLVRAP53004 296 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 FBXL16Q8N461 479 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 PSMA4P25789 261 aaKnown RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 KCNMA1Q12791 1236 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 CYLC2Q14093 348 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 MICU2Q8IYU8 434 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 GLT1D1Q96MS3 346 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 H2AFY2Q9P0M6 372 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-202ENST00000380518 PDP2Q9P2J9 529 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 HAO1Q9UJM8 370 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 USP18Q9UMW8 372 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 NRXN1Q9ULB1 1477 aa16.6■□□□□ 0.25
COL2A1-202ENST00000380518 XPO1O14980 1071 aaKnown RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 STAG3L1P0CL83 205 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 CDH18Q13634 790 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 POP1Q99575 1024 aaKnown RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 THUMPD3Q9BV44 507 aaKnown RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 CXorf56Q9H5V9 222 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 EIF3LQ9Y262 564 aaKnown RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 VCAM1P19320 739 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 GRK2P25098 689 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 PTENP60484 403 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 HIST2H2ACQ16777 129 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 HIST2H2AA3Q6FI13 130 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 TTC33Q6PID6 262 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 SLC47A2Q86VL8 602 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 AP4E1Q9UPM8 1137 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 VPS26AO75436 327 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 FBXO21O94952 628 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 IRX1P78414 480 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
COL2A1-202ENST00000380518 KIAA2013Q8IYS2 634 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 COLEC11Q9BWP8 271 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 CACHD1Q5VU97 1274 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms