RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 WRAP73Q9P2S5 460 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CNOT11Q9UKZ1 510 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PRR12Q9ULL5 1215 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 MYH9P35579 1960 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SLC22A2O15244 555 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ZNF862O60290 1169 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TOMM70O94826 608 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 BAG2O95816 211 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PYGLP06737 847 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ACO1P21399 889 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PRKCHP24723 683 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 YY1P25490 414 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 CDH5P33151 784 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 MAGEA6P43360 314 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 STAT2P52630 851 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 HPCAP84074 193 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 IKQ13123 557 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 NAB1Q13506 487 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 MMEL1Q495T6 779 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 ARMC3Q5W041 872 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SP8Q8IXZ3 490 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TTC17Q96AE7 1141 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 EBF3Q9H4W6 596 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 PRPF19Q9UMS4 504 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 APOBEC2Q9Y235 224 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 SH3BP1Q9Y3L3 701 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 HBS1LQ9Y450 684 aaKnown RBP8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TEX264Q9Y6I9 313 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 LY75O60449 1722 aa8.55□□□□□ -1.04
PTPRR-203ENST00000378778 TCRBV5S1A1TA0A578 114 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 WDR91A4D1P6 747 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 EXTL3O43909 919 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 STK10O94804 968 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 LDHAP00338 332 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 IDO1P14902 403 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 ALOX15P16050 662 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 ATF7P17544 494 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 SSTR1P30872 391 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 COPAP53621 1224 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 PSMC5P62195 406 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 TMPRSS15P98073 1019 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 CUL2Q13617 745 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 SPIDRQ14159 915 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 TREML1Q86YW5 311 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 TTC1Q99614 292 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 CYP26B1Q9NR63 512 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 VPS28Q9UK41 221 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 ARID2Q68CP9 1835 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 A6NJR5 290 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 H3BNX3 289 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 APOC4-APOC2K7ER74 178 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 APOC2P02655 101 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 BPGMP07738 259 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 HARSP12081 509 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 GRK2P25098 689 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 GNA15P30679 374 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 POLR2BP30876 1174 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 HOXA13P31271 388 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 RPL22P35268 128 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 HK2P52789 917 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 GTF2IP78347 998 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 BST1Q10588 318 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 STX3Q13277 289 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 DCTN2Q13561 401 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 FSCBQ5H9T9 825 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 FNBP1LQ5T0N5 605 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 DNAJC24Q6P3W2 148 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 ANKMY2Q8IV38 441 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 NUDCD3Q8IVD9 361 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 TMEM35BQ8NCS4 154 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 ADCY4Q8NFM4 1077 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 GDPD5Q8WTR4 605 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 RSPH1Q8WYR4 309 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 UPF1Q92900 1129 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 MPP4Q96JB8 637 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 HAUS8Q9BT25 410 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 GCOM2Q9BZD3 368 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 XPO7Q9UIA9 1087 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 PPM1HQ9ULR3 514 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 STYXL1Q9Y6J8 313 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 SQORQ9Y6N5 450 aa8.54□□□□□ -1.04
PTPRR-203ENST00000378778 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.54□□□□□ -1.04
PTPRR-203ENST00000378778 SIP14410 1827 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 FAM237BA0A1B0GVD1 139 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 A0A1B0GVG6 124 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ZBTB39O15060 712 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SLC16A4O15374 487 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ENTPD3O75355 529 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 CLPTM1O96005 669 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 CAPNS1P04632 268 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 YWHABP31946 246 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms