RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TNIP3Q96KP6 325 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 NCAPGQ9BPX3 1015 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 SLC4A5Q9BY07 1137 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 SQORQ9Y6N5 450 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 PI4K2BG5E9Z4 385 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 TRAPPC3O43617 180 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 PRMT2P55345 433 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 PPP2R2AP63151 447 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 WSCD1Q658N2 575 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 ANKS1BQ7Z6G8 1248 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 SCUBE3Q8IX30 993 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 C12orf50Q8NA57 414 aaPredicted RBP20.38■□□□□ 0.85
SSU72-204ENST00000378726 RUNDC3BQ96NL0 473 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 RSAD1Q9HA92 442 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 FAM114A2Q9NRY5 505 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 GGA2Q9UJY4 613 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 PODXLO00592 558 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 LRCH4O75427 683 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 FAM163BP0C2L3 166 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 SWT1Q5T5J6 900 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 DUPD1Q68J44 220 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 STK32AQ8WU08 396 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 PGBD4Q96DM1 585 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 RBM41Q96IZ5 413 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 SENP8Q96LD8 212 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 RASAL2Q9UJF2 1139 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 PTCH2Q9Y6C5 1203 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 CASTOR2A6NHX0 329 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 CAND2O75155 1236 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 KRT1P04264 644 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 MNAT1P51948 309 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 MAGOHP61326 146 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 ACTN3Q08043 901 aaPredicted RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 KLF1Q13351 362 aaPredicted RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 SNX1Q13596 522 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 HADHQ16836 314 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 SLC43A3Q8NBI5 491 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 SLC2A14Q8TDB8 520 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 PIWIL1Q96J94 861 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 CHST7Q9NS84 486 aa20.37■□□□□ 0.85
SSU72-204ENST00000378726 DDX56Q9NY93 547 aaKnown RBP20.37■□□□□ 0.85
SSU72-204ENST00000378726 ATP2C2O75185 946 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 GRAP2O75791 330 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 POMCP01189 267 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 RPL9P32969 192 aaKnown RBP20.36■□□□□ 0.85
SSU72-204ENST00000378726 SNX16P57768 344 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 ACAP1Q15027 740 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 MFSD7Q6UXD7 560 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 B3GALNT2Q8NCR0 500 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 RAPGEF5Q92565 580 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 ACSF2Q96CM8 615 aaPredicted RBP20.36■□□□□ 0.85
SSU72-204ENST00000378726 SLITRK1Q96PX8 696 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 MYCBPQ99417 103 aaPredicted RBP20.36■□□□□ 0.85
SSU72-204ENST00000378726 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 TRIM17Q9Y577 477 aa20.36■□□□□ 0.85
SSU72-204ENST00000378726 GABRDO14764 452 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 GABBR2O75899 941 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 RNF8O76064 485 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 SKIP12755 728 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 PDGFRAP16234 1089 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 ZNF143P52747 638 aaPredicted RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 BST2Q10589 180 aaKnown RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 KRT71Q3SY84 523 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 DSTYKQ6XUX3 929 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 POLNQ7Z5Q5 900 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 RXFP2Q8WXD0 754 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 ATG4AQ8WYN0 398 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 CABS1Q96KC9 395 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 PAAF1Q9BRP4 392 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 ZWILCHQ9H900 591 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 ASNSD1Q9NWL6 643 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 KRT10P13645 584 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 GPD1P21695 349 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 ACAT1P24752 427 aaKnown RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 IL1R2P27930 398 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 BCAT1P54687 386 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 SLC6A3Q01959 620 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 SLC25A11Q02978 314 aaKnown RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 UPP1Q16831 310 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 KAZNQ674X7 775 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 C3orf58Q8NDZ4 430 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 SH3TC2Q8TF17 1288 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 B3GNT5Q9BYG0 378 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 DCLK3Q9C098 648 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 UBN1Q9NPG3 1134 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 R3HDM2Q9Y2K5 976 aaKnown RBP20.35■□□□□ 0.85
SSU72-204ENST00000378726 ATP8A1Q9Y2Q0 1164 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 SNX24Q9Y343 169 aa20.35■□□□□ 0.85
SSU72-204ENST00000378726 C2CD4BA6NLJ0 364 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 ARVCFO00192 962 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 PAPSS1O43252 624 aaPredicted RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 KRT7P08729 469 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 PTPN1P18031 435 aaKnown RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 DRG2P55039 364 aaKnown RBP20.34■□□□□ 0.85
SSU72-204ENST00000378726 COPS2P61201 443 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 TAF5Q15542 800 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 KCNT1Q5JUK3 1230 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 TRAF7Q6Q0C0 670 aa20.34■□□□□ 0.85
SSU72-204ENST00000378726 OLFML1Q6UWY5 402 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms