RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 MAP3K7O43318 606 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 KRT34O76011 436 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 ATICP31939 592 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 VEPH1Q14D04 833 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 FOXR1Q6PIV2 292 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 EFHBQ8N7U6 833 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 SLC2A14Q8TDB8 520 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 ZBTB10Q96DT7 871 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 TASP1Q9H6P5 420 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 BAG5Q9UL15 447 aa13.72□□□□□ -0.21
NPHP4-203ENST00000378169 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.72□□□□□ -0.21
NPHP4-203ENST00000378169 RGPD5Q99666 1765 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 PIAS1O75925 651 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 TKTL1P51854 596 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 MORF4L2Q15014 288 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 C15orf59Q2T9L4 293 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-203ENST00000378169 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 PAFAH2Q99487 392 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 SERPINI1Q99574 410 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 FAM167BQ9BTA0 163 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 Q9H521 79 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 TRPC7Q9HCX4 862 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 VTA1Q9NP79 307 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 SLC39A10Q9ULF5 831 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 SPAG6O75602 509 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 LUC7L3O95232 432 aaKnown RBP13.71□□□□□ -0.21
NPHP4-203ENST00000378169 ADIGQ0VDE8 80 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 FOXD4Q12950 439 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-203ENST00000378169 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
NPHP4-203ENST00000378169 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
NPHP4-203ENST00000378169 KCNK1O00180 336 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 PLA2G6O60733 806 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 SNX2O60749 519 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 ZWINTO95229 277 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 MAMLD1Q13495 774 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 BMPR2Q13873 1038 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 ICE2Q659A1 982 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 MTHFD1LQ6UB35 978 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 FRA10AC1Q70Z53 315 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.22
NPHP4-203ENST00000378169 ASIC4Q96FT7 647 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 FGD4Q96M96 766 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 RRAGCQ9HB90 399 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 ADA2Q9NZK5 511 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 ITGA11Q9UKX5 1188 aa13.71□□□□□ -0.22
NPHP4-203ENST00000378169 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CFAP73A6NFT4 308 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PDHA1P08559 390 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 ETS1P14921 441 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PGM1P36871 562 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 NCKAP1LP55160 1127 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CHI3L2Q15782 390 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 MANSC1Q9H8J5 431 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 XAB2Q9HCS7 855 aaKnown RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CES2O00748 559 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CCDC22O60826 627 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 JCHAINP01591 159 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 RAD23BP54727 409 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PDK2Q15119 407 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PDZD8Q8NEN9 1154 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PPHLN1Q8NEY8 458 aaKnown RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 WRAP73Q9P2S5 460 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 STOML1Q9UBI4 398 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 ADAMTSL3P82987 1691 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 GFAPP14136 432 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 CYP2F1P24903 491 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-203ENST00000378169 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 RNF180Q86T96 592 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 SLC26A7Q8TE54 656 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 PLIN4Q96Q06 1357 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 TMEM134Q9H6X4 195 aa13.7□□□□□ -0.22
NPHP4-203ENST00000378169 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 SMAPO00193 183 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 GPR182O15218 404 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 IRF1P10914 325 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 ODC1P11926 461 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 ELK3P41970 407 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 SERPINB9P50453 376 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 FCGRTP55899 365 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-203ENST00000378169 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 E2F7Q96AV8 911 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 LENG9Q96B70 501 aa13.69□□□□□ -0.22
NPHP4-203ENST00000378169 GAD1Q99259 594 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms