RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 BASP1P80723 227 aaKnown RBP11.43□□□□□ -0.58
BEST1-201ENST00000378043 SETDB1Q15047 1291 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 SH2D5Q6ZV89 423 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 PALM2Q8IXS6 379 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 PDIK1LQ8N165 341 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 GIMAP7Q8NHV1 300 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 UBA3Q8TBC4 463 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 TCRBV9S1A1TA0A576 114 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 M0QYV0 167 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 PIK3R2O00459 728 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 IL18RAPO95256 599 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 CBX6O95503 412 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 ELK3P41970 407 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
BEST1-201ENST00000378043 SPATA33Q96N06 139 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 RNPEPQ9H4A4 650 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 TXNRD2Q9NNW7 524 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 NPHS2Q9NP85 383 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 CITO14578 2027 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 C2CD2LO14523 706 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 MCF2LO15068 1137 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 AVILO75366 819 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 DCTN3O75935 186 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 RNF8O76064 485 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 C1QAP02745 245 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 STAG3L1P0CL83 205 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 PCK1P35558 622 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ZNF143P52747 638 aaPredicted RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 RNASELQ05823 741 aaKnown RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 KCNJ11Q14654 390 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ACAP1Q15027 740 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 NOMO1Q15155 1222 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 CTC1Q2NKJ3 1217 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 PARP6Q2NL67 630 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 C15orf59Q2T9L4 293 aaPredicted RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 FAM102AQ5T9C2 384 aaPredicted RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 FBXO16Q8IX29 292 aaPredicted RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 SERAC1Q96JX3 654 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 USP29Q9HBJ7 922 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.42□□□□□ -0.58
BEST1-201ENST00000378043 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 SCN1AP35498 2009 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 C2CD4BA6NLJ0 364 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 IRF6O14896 467 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 GM2AP17900 193 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 IL4RP24394 825 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ALDH3A1P30838 453 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ETV4P43268 484 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 IRX3P78415 501 aaPredicted RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 OVGP1Q12889 678 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 AMHR2Q16671 573 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 SLC10A6Q3KNW5 377 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 NLRP9Q7RTR0 991 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 RFWD2Q8NHY2 731 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ADPGKQ9BRR6 497 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 VPS11Q9H270 941 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 VRTNQ9H8Y1 702 aa11.42□□□□□ -0.58
BEST1-201ENST00000378043 ALG13Q9NP73 1137 aaKnown RBP11.42□□□□□ -0.58
BEST1-201ENST00000378043 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TM9SF1O15321 606 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 ATP5HO75947 161 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 HMGCRP04035 888 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 DHRS4L1P0CG22 281 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 CDH6P55285 790 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 Q3C1V9 767 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TAF1BQ53T94 588 aaPredicted RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 SLC45A4Q5BKX6 768 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 ZNF449Q6P9G9 518 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 GADL1Q6ZQY3 521 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 EXOC8Q8IYI6 725 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 RXFP2Q8WXD0 754 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 INPP5DQ92835 1189 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 FAXDC2Q96IV6 333 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 CYTH2Q99418 400 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 CNPY3Q9BT09 278 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TBC1D10AQ9BXI6 508 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 NOP53Q9NZM5 478 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 NKX1-2Q9UD57 310 aaPredicted RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 ZSWIM8A7E2V4 1837 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 E5RJQ4 531 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 SMAPO00193 183 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 GRAP2O75791 330 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 C22orf31O95567 290 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 PFKMP08237 780 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TSHRP16473 764 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms