RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF512Q96ME7 567 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 OSBPL7Q9BZF2 842 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SDCBP2Q9H190 292 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 VPS11Q9H270 941 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CDC42EP4Q9H3Q1 356 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 HTTP42858 3142 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SMIM28A0A1B0GU29 152 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CNMDO75829 334 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CSE1LP55060 971 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 E2F5Q15329 346 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 ASTE1Q2TB18 679 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 ZNF484Q5JVG2 852 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 C3orf62Q6ZUJ4 267 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SYN2Q92777 582 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 EXOC2Q96KP1 924 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CAPNS2Q96L46 248 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SENP8Q96LD8 212 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 ULBP1Q9BZM6 244 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CARD9Q9H257 536 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 ASNSD1Q9NWL6 643 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 UVRAGQ9P2Y5 699 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 TTC3P53804 2025 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 RPTORQ8N122 1335 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 NCOR1O75376 2440 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 MYBPHLA2RUH7 354 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 XPOTO43592 962 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PPP1R37O75864 691 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PROSCO94903 275 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 MT-CO1P00395 513 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 CHRNA3P32297 505 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 OGDHQ02218 1023 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SP3Q02447 781 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 EFEMP1Q12805 493 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 EFTUD2Q15029 972 aaKnown RBP eCLIP8.47□□□□□ -1.051e-7■■■■■ 27.1
CKAP2-203ENST00000378037 FAM110CQ1W6H9 321 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 FAM171A1Q5VUB5 890 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 HEATR6Q6AI08 1181 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 GLB1LQ6UWU2 654 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 TTC30BQ8N4P2 665 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SKA2Q8WVK7 121 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 AUTS2Q8WXX7 1259 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SCYL1Q96KG9 808 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 ZNF518BQ9C0D4 1074 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 TSPYL2Q9H2G4 693 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 IFT122Q9HBG6 1241 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 SARS2Q9NP81 518 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 MED4Q9NPJ6 270 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 PLK2Q9NYY3 685 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 XPO7Q9UIA9 1087 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 NOCTQ9UK39 431 aaKnown RBP8.47□□□□□ -1.05
CKAP2-203ENST00000378037 MFHAS1Q9Y4C4 1052 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 IPPQ9Y573 584 aa8.47□□□□□ -1.05
CKAP2-203ENST00000378037 HOXC6P09630 235 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 CHN1P15882 459 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 GPD1P21695 349 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 HOXA7P31268 230 aaPredicted RBP8.46□□□□□ -1.05
CKAP2-203ENST00000378037 GRK4P32298 578 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 ROR1Q01973 937 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 PCGF5Q86SE9 256 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 ARFGAP2Q8N6H7 521 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 SCAMP5Q8TAC9 235 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 VTA1Q9NP79 307 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 PADI3Q9ULW8 664 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 MROH7Q68CQ1 1323 aa8.46□□□□□ -1.05
CKAP2-203ENST00000378037 TPRP12270 2363 aaKnown RBP8.46□□□□□ -1.05
CKAP2-203ENST00000378037 PLA2G6O60733 806 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TBX18O95935 607 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 PECAM1P16284 738 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 RBL1P28749 1068 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 MSH2P43246 934 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 JAM2P57087 298 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GCNT1Q02742 428 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 DNAJC3Q13217 504 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SURF1Q15526 300 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 HIF1AQ16665 826 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SLC39A12Q504Y0 691 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 HABP4Q5JVS0 413 aaKnown RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 BTBD8Q5XKL5 378 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 OTOP2Q7RTS6 562 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SPATA2LQ8IUW3 424 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 EXOC8Q8IYI6 725 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 KIF2BQ8N4N8 673 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 IPMKQ8NFU5 416 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 ATL2Q8NHH9 583 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 MAML1Q92585 1016 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TRIM11Q96F44 468 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 C12orf42Q96LP6 360 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 MFSD14AQ96MC6 490 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 CYP2S1Q96SQ9 504 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms