RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CHN1P15882 459 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 GRM5P41594 1212 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 NFE2Q16621 373 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 CHSY1Q86X52 802 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 NXF3Q9H4D5 531 aaKnown RBP15.11■□□□□ 0.01
TCOF1-202ENST00000377797 TRPC7Q9HCX4 862 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 COL1A2P08123 1366 aa15.11■□□□□ 0.01
TCOF1-202ENST00000377797 ARIH2O95376 493 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 CRYBB1P53674 252 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 CRLF3Q8IUI8 442 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 PSMC3IPQ9P2W1 217 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 ZNF200P98182 395 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 ELMSAN1Q6PJG2 1045 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 GPR25O00155 361 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 KLC3Q6P597 504 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 UNC93AQ86WB7 457 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 EDEM1Q92611 657 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 CAVIN3Q969G5 261 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 LENG1Q96BZ8 264 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 SMIM35A0A1B0GVV1 85 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 FAM153BP0C7A2 387 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 DARSP14868 501 aaKnown RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 VCPP55072 806 aaKnown RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 RPL7AP62424 266 aaKnown RBP15.1■□□□□ 0.01
TCOF1-202ENST00000377797 SLC6A3Q01959 620 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 FAM153CQ494X1 144 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 WSCD1Q658N2 575 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 RASSF3Q86WH2 238 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 FAM153AQ9UHL3 310 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 ST3GAL5Q9UNP4 418 aa15.1■□□□□ 0.01
TCOF1-202ENST00000377797 MYH6P13533 1939 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ALDH2P05091 517 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 RECQLP46063 649 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 SNX17Q15036 470 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ZNF449Q6P9G9 518 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 WDR75Q8IWA0 830 aaKnown RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 CDC42EP4Q9H3Q1 356 aaKnown RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ALG13Q9NP73 1137 aaKnown RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 SLC8A2Q9UPR5 921 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ANKRD36CQ5JPF3 1778 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 TREHO43280 583 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 MTSS1O43312 755 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 HOXA2O43364 376 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 PHF13Q86YI8 300 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 MYLK4Q86YV6 388 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ZDHHC17Q8IUH5 632 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ATP6V1E2Q96A05 226 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 RMDN1Q96DB5 314 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 KLF6Q99612 283 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 DCTN4Q9UJW0 460 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 MYH1P12882 1939 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 SIGLEC16A6NMB1 481 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ANO4Q32M45 955 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 ATP13A4Q4VNC1 1196 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 C4orf22Q6V702 233 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 DEFB106AQ8N104 65 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 EXT2Q93063 718 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 FBXO32Q969P5 355 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 HES6Q96HZ4 224 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 TBCBQ99426 244 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 G3BP2Q9UN86 482 aaKnown RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 LCA5LO95447 670 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 RPL21P46778 160 aaKnown RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 RNF219Q5W0B1 726 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-202ENST00000377797 UMODL1Q5DID0 1318 aa15.09■□□□□ 0.01
TCOF1-202ENST00000377797 HSPA4LO95757 839 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 IRAK1P51617 712 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 JAM2P57087 298 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 DAB2IPQ5VWQ8 1189 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 LLGL2Q6P1M3 1020 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 NUDCD3Q8IVD9 361 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 ALG3Q92685 438 aa15.08■□□□□ 0.01
TCOF1-202ENST00000377797 PRMT1Q99873 361 aaKnown RBP15.08■□□□□ 0.01
TCOF1-202ENST00000377797 TMEM120BA0PK00 339 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 H3BQF6 201 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 SPAG6O75602 509 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 ALDH1A3P47895 512 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 FSTL1Q12841 308 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 KATNAL2Q8IYT4 538 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 C12orf29Q8N999 325 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 FRMD8Q9BZ67 464 aaPredicted RBP15.08■□□□□ 0
TCOF1-202ENST00000377797 DNPEPQ9ULA0 475 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 SMG5Q9UPR3 1016 aaKnown RBP15.08■□□□□ 0
TCOF1-202ENST00000377797 CNTNAP2Q9UHC6 1331 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 TCP11X1B4DZS4 312 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 CABYRO75952 493 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 ELNP15502 786 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 LSP1P33241 339 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 ERMARDQ5T6L9 678 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms