RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 VCX3AQ9NNX9 186 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 LCTP09848 1927 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 SGK1O00141 431 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 MAP3K7O43318 606 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 IFNB1P01574 187 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 TAP1Q03518 808 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 AP1B1Q10567 949 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 CYP4A22Q5TCH4 519 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 CLNKQ7Z7G1 428 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 SESTD1Q86VW0 696 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 ARFGAP1Q8N6T3 406 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 NCSTNQ92542 709 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 MRRFQ96E11 262 aaKnown RBP14.47□□□□□ -0.09
SF1-205ENST00000377394 SAE1Q9UBE0 346 aaPredicted RBP14.47□□□□□ -0.09
SF1-205ENST00000377394 ZNF112Q9UJU3 913 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 DOCK1Q14185 1865 aa14.47□□□□□ -0.09
SF1-205ENST00000377394 GOLGA8SH3BPF8 625 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 GOLGA8MH3BSY2 632 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
SF1-205ENST00000377394 FAM200BP0CF97 657 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.09
SF1-205ENST00000377394 PLCB3Q01970 1234 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 OVGP1Q12889 678 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 GRM1Q13255 1194 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 ACBD5Q5T8D3 534 aaPredicted RBP14.46□□□□□ -0.09
SF1-205ENST00000377394 ZPBP2Q6X784 338 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 ANKMY2Q8IV38 441 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 PPFIBP2Q8ND30 876 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 NIF3L1Q9GZT8 377 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 C10orf88Q9H8K7 445 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 PPCSQ9HAB8 311 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 AS3MTQ9HBK9 375 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 STK32BQ9NY57 414 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 PSMC3IPQ9P2W1 217 aaPredicted RBP14.46□□□□□ -0.09
SF1-205ENST00000377394 RABGEF1Q9UJ41 708 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 HACL1Q9UJ83 578 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 PCDHGC3Q9UN70 934 aa14.46□□□□□ -0.09
SF1-205ENST00000377394 CFAP69A5D8W1 941 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 GSC2O15499 205 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 CA4P22748 312 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 GDF10P55107 478 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 SLC25A11Q02978 314 aaKnown RBP14.46□□□□□ -0.1
SF1-205ENST00000377394 LSAMPQ13449 338 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 STXBP2Q15833 593 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 MSS51Q4VC12 460 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 LIN52Q52LA3 116 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 ANKRD22Q5VYY1 191 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 OTOAQ7RTW8 1153 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 SAMD7Q7Z3H4 446 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 POLNQ7Z5Q5 900 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 ZBTB33Q86T24 672 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 LCA5Q86VQ0 697 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 WDR83Q9BRX9 315 aaKnown RBP14.46□□□□□ -0.1
SF1-205ENST00000377394 ZNF232Q9UNY5 417 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 FZD1Q9UP38 647 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 SNCAIPQ9Y6H5 919 aa14.46□□□□□ -0.1
SF1-205ENST00000377394 MSCO60682 206 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 WEE2P0C1S8 567 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 AMPD1P23109 780 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 RFC1P35251 1148 aaPredicted RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 THOC5Q13769 683 aaKnown RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 HIF1AQ16665 826 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 FNBP1LQ5T0N5 605 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 CATSPERGQ6ZRH7 1159 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 ACTL9Q8TC94 416 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 CPT1BQ92523 772 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 ASCC2Q9H1I8 757 aaPredicted RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 CYLDQ9NQC7 956 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 KANSL3Q9P2N6 904 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 NDC80O14777 642 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 IL1R2P27930 398 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 GEMIN4P57678 1058 aaKnown RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 OTUD4Q01804 1114 aaKnown RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 EFTUD2Q15029 972 aaKnown RBP eCLIP14.45□□□□□ -0.16e-8■■■■■ 29
SF1-205ENST00000377394 KIAA0319LQ8IZA0 1049 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 NAT8LQ8N9F0 302 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 DHRS4Q9BTZ2 278 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 SSU72Q9NP77 194 aaKnown RBP14.45□□□□□ -0.1
SF1-205ENST00000377394 EFR3BQ9Y2G0 817 aa14.45□□□□□ -0.1
SF1-205ENST00000377394 ASPAP45381 313 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 DYNLT1P63172 113 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 CNTN2Q02246 1040 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 TFDP1Q14186 410 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 TAZQ16635 292 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 PTPN20Q4JDL3 420 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 DENND1BQ6P3S1 775 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 RINLQ6ZS11 566 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 PCGF5Q86SE9 256 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 RFWD2Q8NHY2 731 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 PRPF31Q8WWY3 499 aaKnown RBP14.44□□□□□ -0.1
SF1-205ENST00000377394 WRNIP1Q96S55 665 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 BTBD10Q9BSF8 475 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 PHACTR1Q9C0D0 580 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
SF1-205ENST00000377394 TJP2Q9UDY2 1190 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 FETUBQ9UGM5 382 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 CYTH4Q9UIA0 394 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 WDR91A4D1P6 747 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 GYG2O15488 501 aa14.44□□□□□ -0.1
SF1-205ENST00000377394 LRCH4O75427 683 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms