RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 CCDC14Q49A88 953 aa18.34■□□□□ 0.53
NKX2-2-201ENST00000377142 TMEM109Q9BVC6 243 aa18.34■□□□□ 0.53
NKX2-2-201ENST00000377142 CDC42EP4Q9H3Q1 356 aaKnown RBP18.34■□□□□ 0.53
NKX2-2-201ENST00000377142 PCDH9Q9HC56 1237 aa18.34■□□□□ 0.53
NKX2-2-201ENST00000377142 GIT1Q9Y2X7 761 aa18.34■□□□□ 0.53
NKX2-2-201ENST00000377142 ENDOD1O94919 500 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 SHBGP04278 402 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 DYNLT1P63172 113 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 CDO1Q16878 200 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 P3H1Q32P28 736 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 HIBCHQ6NVY1 386 aaPredicted RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 CYP4V2Q6ZWL3 525 aaPredicted RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 SLC26A9Q7LBE3 791 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 ARCQ7LC44 396 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 RFX6Q8HWS3 928 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 PCSK9Q8NBP7 692 aaKnown RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 B3GALNT2Q8NCR0 500 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 ACTL9Q8TC94 416 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 TEKT4Q8WW24 435 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 HSFY1Q96LI6 401 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 CFAP57Q96MR6 1250 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.33■□□□□ 0.52
NKX2-2-201ENST00000377142 APOC4-APOC2K7ER74 178 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CYB561D2O14569 222 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 DNALI1O14645 258 aaPredicted RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 APOC2P02655 101 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 THP07101 528 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CD48P09326 243 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CHKAP35790 457 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 ARSEP51690 589 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 SP3Q02447 781 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 PTGISQ16647 500 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 SH3PXD2AQ5TCZ1 1133 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CCSAPQ6IQ19 270 aaPredicted RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 OSTM1Q86WC4 334 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 SCUBE3Q8IX30 993 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 SLC2A14Q8TDB8 520 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 TBCBQ99426 244 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CALN1Q9BXU9 219 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 BCCIPQ9P287 314 aaKnown RBP eCLIP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 GABBR2O75899 941 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 THPOP40225 353 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 PTPN9P43378 593 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 RAB27AP51159 221 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 CDH6P55285 790 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 GNGT1P63211 74 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 PLCB3Q01970 1234 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 PDK2Q15119 407 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 TAF5Q15542 800 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 VSIG1Q86XK7 387 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 MAP7D3Q8IWC1 876 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 GSTCDQ8NEC7 633 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 FAM172AQ8WUF8 416 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 PGM2Q96G03 612 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 GAD1Q99259 594 aa18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 HNRNPABQ99729 332 aaKnown RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
NKX2-2-201ENST00000377142 MEIS3P2A8K0S8 358 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 SGK1O00141 431 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 XPO1O14980 1071 aaKnown RBP18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 ATP1A2P50993 1020 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 SLC8A3P57103 927 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 ATP11AP98196 1134 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 TFDP2Q14188 446 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 RELL1Q8IUW5 271 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 ZCCHC9Q8N567 271 aaKnown RBP18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 TLCD1Q96CP7 247 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 B3GNT5Q9BYG0 378 aa18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 NOVA2Q9UNW9 492 aaKnown RBP18.31■□□□□ 0.52
NKX2-2-201ENST00000377142 GABRDO14764 452 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 ELNP15502 786 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 HPDP32754 393 aaPredicted RBP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 IRAK1P51617 712 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 TMEM86AQ8N2M4 240 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 TMEM121Q9BTD3 319 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 MAK16Q9BXY0 300 aaKnown RBP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 MCF2LO15068 1137 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 MDM4O15151 490 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 EIF3HO15372 352 aaKnown RBP eCLIP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 CAND2O75155 1236 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 TKTP29401 623 aaKnown RBP18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 GPS1Q13098 491 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 DPYSL3Q14195 570 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 KRT81Q14533 505 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 MORF4L2Q15014 288 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 ZSCAN26Q16670 478 aa18.3■□□□□ 0.52
NKX2-2-201ENST00000377142 WSCD1Q658N2 575 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms