RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PNKPQ96T60 521 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 SYT15Q9BQS2 421 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 FOXP3Q9BZS1 431 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 RIC8BQ9NVN3 520 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 GRID1Q9ULK0 1009 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 USP38Q8NB14 1042 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 TAS1R2Q8TE23 839 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 RNF112Q9ULX5 631 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 NCF1BA6NI72 391 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 NCF1CA8MVU1 366 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 NCF1P14598 390 aaPredicted RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 ACAT1P24752 427 aaKnown RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 FAM83EQ2M2I3 478 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 RARS2Q5T160 578 aaKnown RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 TMC2Q8TDI7 906 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 RANBP17Q9H2T7 1088 aaKnown RBP14.12□□□□□ -0.15
GPC6-201ENST00000377047 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 AP4E1Q9UPM8 1137 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 PCDH8O95206 1070 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 BLVRAP53004 296 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 OAZ1P54368 228 aa14.12□□□□□ -0.15
GPC6-201ENST00000377047 SEC24DO94855 1032 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 HSPA1AP0DMV8 641 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 HSPA1BP0DMV9 641 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 NCALDP61601 193 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 AMPD2Q01433 879 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 OCA2Q04671 838 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PHACTR4Q8IZ21 702 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ZSWIM1Q9BR11 485 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PPCSQ9HAB8 311 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 IL1RL2Q9HB29 575 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 THG1LQ9NWX6 298 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 DTNAQ9Y4J8 743 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 TSPAN3O60637 253 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 MED21Q13503 144 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 DDX39BQ13838 428 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 SLC47A2Q86VL8 602 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 TCRBV5S4A2TA0A5A2 114 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ALOX15P16050 662 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 CD44P16070 742 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 DDR1Q08345 913 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PTPAQ15257 358 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PHKG1Q16816 387 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 DDX42Q86XP3 938 aaKnown RBP eCLIP14.11□□□□□ -0.15
GPC6-201ENST00000377047 SLC13A5Q86YT5 568 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 SH2D3CQ8N5H7 860 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 EDEM1Q92611 657 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 ERP44Q9BS26 406 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 NT5MQ9NPB1 228 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 IL17RBQ9NRM6 502 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 RPS6KL1Q9Y6S9 549 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PXDNQ92626 1479 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ATXN3P54252 364 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 DAB2P98082 770 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 LVRNQ6Q4G3 990 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ELOA2Q8IYF1 753 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 ATXN3LQ9H3M9 355 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 USP18Q9UMW8 372 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PDHA1P08559 390 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 STIP1P31948 543 aaKnown RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 TOB1P50616 345 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 PSMC6P62333 389 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 PLCL1Q15111 1095 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ABTB1Q969K4 478 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 FICDQ9BVA6 458 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 KCNF1Q9H3M0 494 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 ZNF556Q9HAH1 456 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 TRPV2Q9Y5S1 764 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 COL5A2P05997 1499 aaPredicted RBP14.11□□□□□ -0.15
GPC6-201ENST00000377047 BCL9O00512 1426 aa14.11□□□□□ -0.15
GPC6-201ENST00000377047 KCNK10P57789 538 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 CAMK2GQ13555 558 aaPredicted RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 TFDP3Q5H9I0 405 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 FAM136AQ96C01 138 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 OSGEPL1Q9H4B0 414 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 PDGFCQ9NRA1 345 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 PRUNE1Q86TP1 453 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.1□□□□□ -0.15
GPC6-201ENST00000377047 DNAJC7Q99615 494 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 PRPF18Q99633 342 aaKnown RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 CENPAP49450 140 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 CHI3L2Q15782 390 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 UNC45BQ8IWX7 931 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 PCYOX1LQ8NBM8 494 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 ZNF518BQ9C0D4 1074 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 ARL2BPQ9Y2Y0 163 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms