RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ARID3BQ8IVW6 561 aaPredicted RBP12.02□□□□□ -0.49
VPS13A-205ENST00000376636 TRPV3Q8NET8 790 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 KCND2Q9NZV8 630 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 IRAK3Q9Y616 596 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 MYH7P12883 1935 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 POTEMA6NI47 508 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 GLRA3O75311 464 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 SLC2A3P11169 496 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 ZNF614Q8N883 585 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 SLC26A4O43511 780 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 ATG7O95352 703 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.49
VPS13A-205ENST00000376636 PGS1Q32NB8 556 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 USP33Q8TEY7 942 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 MMADHCQ9H3L0 296 aaPredicted RBP12.02□□□□□ -0.49
VPS13A-205ENST00000376636 TTC26A0AVF1 554 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 NEK5Q6P3R8 708 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 LRRC6Q86X45 466 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 ROGDIQ9GZN7 287 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 NUAK2Q9H093 628 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 OSBPL3Q9H4L5 887 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 ASB14A6NK59 587 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 P4HA2O15460 535 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 LBPP18428 481 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 ENTPD7Q9NQZ7 604 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 AKR1B1P15121 316 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 VAV1P15498 845 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 FAM220AQ7Z4H9 259 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 CAPN10Q9HC96 672 aa12.02□□□□□ -0.49
VPS13A-205ENST00000376636 TFE3P19532 575 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 NRG3P56975 720 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SH2D3CQ8N5H7 860 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CINPQ9BW66 212 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 A0A087WWV3 80 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SKP1P63208 163 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TRPC4APQ8TEL6 797 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TAGLN3Q9UI15 199 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PCDHA6Q9UN73 950 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PCDHA8Q9Y5H6 950 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ZW10O43264 779 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PSMC5P62195 406 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PLA2G4FQ68DD2 849 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 IZUMO2Q6UXV1 221 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 OXCT2Q9BYC2 517 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 LNPEPQ9UIQ6 1025 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TRIM66O15016 1216 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 KPNA6O60684 536 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ADARP55265 1226 aaKnown RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TSHZ1Q6ZSZ6 1077 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 UGT2B28Q9BY64 529 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 MYH8P13535 1937 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 GNA13Q14344 377 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 MIER2Q8N344 545 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 NAT9Q9BTE0 207 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TMEM138Q9NPI0 162 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 RPS6KA5O75582 802 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ATP5BP06576 529 aaKnown RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 POLD3Q15054 466 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ERO1BQ86YB8 467 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 LOC100653049A0A140TA62 436 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ZMYND11Q15326 602 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 TTC23Q5W5X9 447 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 STARD8Q92502 1023 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PAIP1Q9H074 479 aaKnown RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CLRN2A0PK11 232 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 AHCYL1O43865 530 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CEBPAP49715 358 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 NFYCQ13952 458 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CAMK1Q14012 370 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 LPIN1Q14693 890 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 RUNDC3AQ59EK9 446 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CRNNQ9UBG3 495 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SNX4O95219 450 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SCTRP47872 440 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 RFX3P48380 749 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 AKR1D1P51857 326 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
VPS13A-205ENST00000376636 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 SYTL1Q8IYJ3 562 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 CHPFQ8IZ52 775 aa12.01□□□□□ -0.49
VPS13A-205ENST00000376636 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
VPS13A-205ENST00000376636 IDH3BO43837 385 aa12□□□□□ -0.49
VPS13A-205ENST00000376636 DDHD2O94830 711 aa12□□□□□ -0.49
VPS13A-205ENST00000376636 DGKDQ16760 1214 aa12□□□□□ -0.49
VPS13A-205ENST00000376636 C9orf16Q9BUW7 83 aa12□□□□□ -0.49
VPS13A-205ENST00000376636 AKAP7Q9P0M2 348 aaPredicted RBP12□□□□□ -0.49
VPS13A-205ENST00000376636 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms