RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 VCPIP1Q96JH7 1222 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 NMUR2Q9GZQ4 415 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 KCNK13Q9HB14 408 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 APOBEC3GQ9HC16 384 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CCL15-CCL14A0A0B4J2E2 113 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ENO1P06733 434 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ITGAVP06756 1048 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 SP4Q02446 784 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF252P-AS1Q0IIN9 211 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 PTK7Q13308 1070 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CCL15Q16663 113 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZACNQ401N2 412 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 FOXB2Q5VYV0 432 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ANO5Q75V66 913 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ACTL9Q8TC94 416 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 NSUN6Q8TEA1 469 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 DCAKDQ8WVC6 231 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 OXNAD1Q96HP4 312 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZCWPW1Q9H0M4 648 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZWILCHQ9H900 591 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 TCRBV7S3A2A0A539 114 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 TMEM191CA6NGB0 347 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 WDR64B1ANS9 1081 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 BAG2O95816 211 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CCNE2O96020 404 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 GSTA2P09210 222 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 DLDP09622 509 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 TMEM191BP0C7N4 346 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CCND2P30279 289 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 NEK3P51956 506 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 OTUD4Q01804 1114 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 OGDHQ02218 1023 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 PCGF5Q86SE9 256 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CFAP61Q8NHU2 1237 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 BRI3BPQ8WY22 251 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 IQCGQ9H095 443 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 PTPRJQ12913 1337 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 TRPM7Q96QT4 1865 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 PYGBP11216 843 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 CDKN2BP42772 138 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 NLRP11P59045 1033 aaKnown RBP11.58□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 MZB1Q8WU39 189 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 SERAC1Q96JX3 654 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 CYTH2Q99418 400 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 KRT82Q9NSB4 513 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 PPARGC1AQ9UBK2 798 aaKnown RBP11.58□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF212Q9UDV6 495 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 NFASCO94856 1347 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 NDC80O14777 642 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 INHBAP08476 426 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 RARBP10826 455 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 KDSRQ06136 332 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 KCNT1Q5JUK3 1230 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 FAM182AQ5T1J6 154 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 CCDC110Q8TBZ0 833 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF606Q8WXB4 792 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 TTC1Q99614 292 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 MROH8Q9H579 483 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 ANKEF1Q9NU02 776 aa11.58□□□□□ -0.56
CCDC40-203ENST00000374877 XPO7Q9UIA9 1087 aaKnown RBP11.58□□□□□ -0.56
CCDC40-203ENST00000374877 IQANK1A0A1B0GTG1 560 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 SMAPO00193 183 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MAFGO15525 162 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CST8O60676 142 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 DNAJC6O75061 913 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 TMEM63AO94886 807 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 VNN1O95497 513 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 GARTP22102 1010 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MMP8P22894 467 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 HUNKP57058 714 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 YWHAGP61981 247 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 FAAP100Q0VG06 881 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 PRKD1Q15139 912 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 NBPF20Q3BBV1 942 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 IZUMO2Q6UXV1 221 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 VSIG10LQ86VR7 867 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CLPTM1LQ96KA5 538 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 TRAPPC9Q96Q05 1148 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MMADHCQ9H3L0 296 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 ANGPTL2Q9UKU9 493 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 BTBD19C9JJ37 291 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 E5RJQ4 531 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 PDHXO00330 501 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms