RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CDC25CP30307 473 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 SSTR3P32745 418 aaPredicted RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 KRT9P35527 623 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 CCR2P41597 374 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 KCNQ1P51787 676 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 USP46P62068 366 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 ZBED6P86452 979 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 GAREM2Q75VX8 874 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 GPRIN1Q7Z2K8 1008 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 ZNF397Q8NF99 534 aaPredicted RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 KCTD13Q8WZ19 329 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 ASB2Q96Q27 587 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 PHF7Q9BWX1 381 aaPredicted RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 NUCKS1Q9H1E3 243 aaKnown RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 FBXO44Q9H4M3 255 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 MRPS23Q9Y3D9 190 aaKnown RBP15.85■□□□□ 0.13
HSPG2-201ENST00000374673 USP3Q9Y6I4 520 aa15.85■□□□□ 0.13
HSPG2-201ENST00000374673 YWHAQP27348 245 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 CASP14P31944 242 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 CDH5P33151 784 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-201ENST00000374673 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
HSPG2-201ENST00000374673 KIF11P52732 1056 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 SFMBT2Q5VUG0 894 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 IRF2BP2Q7Z5L9 587 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 TMEM150AQ86TG1 271 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 SCAMP5Q8TAC9 235 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 ITFG1Q8TB96 612 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 SHKBP1Q8TBC3 707 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 STK32AQ8WU08 396 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 OVCA2Q8WZ82 227 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 TCEAL4Q96EI5 215 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 HSFY1Q96LI6 401 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 GCNAQ96QF7 691 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 USTQ9Y2C2 406 aa15.84■□□□□ 0.13
HSPG2-201ENST00000374673 LUC7L2Q9Y383 392 aaKnown RBP15.84■□□□□ 0.13
HSPG2-201ENST00000374673 SPTBN5Q9NRC6 3674 aaKnown RBP15.84■□□□□ 0.13
HSPG2-201ENST00000374673 NUP210Q8TEM1 1887 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-201ENST00000374673 A0A1W2PRU2 124 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 TADA3O75528 432 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 MMEP08473 750 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 PRKCIP41743 596 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 PPP3CCP48454 512 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 FMO1Q01740 532 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 CDR2Q01850 454 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 ARID5AQ03989 594 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 IFRD2Q12894 506 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-201ENST00000374673 TAF10Q12962 218 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 ASIC2Q16515 512 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 TAF3Q5VWG9 929 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-201ENST00000374673 PMF1Q6P1K2 205 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 GET4Q7L5D6 327 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-201ENST00000374673 TMC6Q7Z403 805 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 SCML4Q8N228 414 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 WDTC1Q8N5D0 677 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 PDZD8Q8NEN9 1154 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 SLC20A1Q8WUM9 679 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 CPLX3Q8WVH0 158 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 SYN2Q92777 582 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-201ENST00000374673 SLITRK1Q96PX8 696 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 ATXN3LQ9H3M9 355 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 CYLDQ9NQC7 956 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.83■□□□□ 0.12
HSPG2-201ENST00000374673 PRKAG3Q9UGI9 489 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 CEP83Q9Y592 693 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 NCANO14594 1321 aa15.83■□□□□ 0.12
HSPG2-201ENST00000374673 SOBPA7XYQ1 873 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 NRG2O14511 850 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-201ENST00000374673 TPM1P09493 284 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 BMP1P13497 986 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 GJA1P17302 382 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 CEBPBP17676 345 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 CHRNB2P17787 502 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 TKTL1P51854 596 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 TBX2Q13207 712 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-201ENST00000374673 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 CCDC186Q7Z3E2 898 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 PASD1Q8IV76 773 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.82■□□□□ 0.12
HSPG2-201ENST00000374673 NPAS3Q8IXF0 933 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 FGF13Q92913 245 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 FBXO32Q969P5 355 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 SLC4A5Q9BY07 1137 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 PDCL3Q9H2J4 239 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 LRRC4Q9HBW1 653 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 CYTH4Q9UIA0 394 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 ZMYM5Q9UJ78 669 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 CDH7Q9ULB5 785 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 SCML2Q9UQR0 700 aa15.82■□□□□ 0.12
HSPG2-201ENST00000374673 ZFP37Q9Y6Q3 630 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-201ENST00000374673 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
HSPG2-201ENST00000374673 COL6A3P12111 3177 aa15.81■□□□□ 0.12
HSPG2-201ENST00000374673 GABBR2O75899 941 aa15.81■□□□□ 0.12
HSPG2-201ENST00000374673 LSM8O95777 96 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms