RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TLE6Q9H808 572 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 ENTPD7Q9NQZ7 604 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 ABI2Q9NYB9 513 aaPredicted RBP18.49■□□□□ 0.55
PFDN6-201ENST00000374606 ZFHX2Q9C0A1 2572 aaPredicted RBP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 MYH10P35580 1976 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 ZSCAN12O43309 604 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 AP1G2O75843 785 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 FTLP02792 175 aaPredicted RBP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 NPR3P17342 541 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 RPL17P18621 184 aaKnown RBP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 GPD2P43304 727 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 CDR1P51861 262 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 ROR1Q01973 937 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 PDE4CQ08493 712 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 SMARCB1Q12824 385 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 PDCLQ13371 301 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 RSPO2Q6UXX9 243 aaPredicted RBP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 PAQR9Q6ZVX9 377 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 TMC7Q7Z402 723 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 KIAA1524Q8TCG1 905 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 IPO4Q8TEX9 1081 aaKnown RBP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 AUTS2Q8WXX7 1259 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 ASIC4Q96FT7 647 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 FUBP3Q96I24 572 aaKnown RBP eCLIP18.48■□□□□ 0.55
PFDN6-201ENST00000374606 TCF25Q9BQ70 676 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 C11orf70Q9BRQ4 267 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 DUSP16Q9BY84 665 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 TLR9Q9NR96 1032 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 PCDHB5Q9Y5E4 795 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 PCDHGC5Q9Y5F6 944 aa18.48■□□□□ 0.55
PFDN6-201ENST00000374606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 MTMR11A4FU01 709 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 XPO1O14980 1071 aaKnown RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 ABCB4P21439 1286 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 BDNFP23560 247 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 OR1D2P34982 312 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 SMC1AQ14683 1233 aaKnown RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 CFAP221Q4G0U5 840 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 MMS22LQ6ZRQ5 1243 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 CLEC20AQ6ZU45 233 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 ZSCAN30Q86W11 494 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 DNAAF5Q86Y56 855 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 PHF13Q86YI8 300 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 SPPL2BQ8TCT7 592 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 MICAL1Q8TDZ2 1067 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 C2orf15Q8WU43 125 aaKnown RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 CTNNBL1Q8WYA6 563 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 SUSD6Q92537 303 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 ATOH1Q92858 354 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 PGLYRP2Q96PD5 576 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 CLSTN3Q9BQT9 956 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 PACSIN1Q9BY11 444 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 RHOBTB2Q9BYZ6 727 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 SYNCQ9H7C4 482 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 DMAP1Q9NPF5 467 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.47■□□□□ 0.55
PFDN6-201ENST00000374606 INTUQ9ULD6 942 aa18.47■□□□□ 0.55
PFDN6-201ENST00000374606 PATJQ8NI35 1801 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 ANKRD62A6NC57 917 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 ADAM12O43184 909 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 CALB1P05937 261 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 TMEM253P0C7T8 217 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 MMP8P22894 467 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 AVPR2P30518 371 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 PLA2G4AP47712 749 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 GALCP54803 685 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
PFDN6-201ENST00000374606 PTPN20Q4JDL3 420 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 MON1BQ7L1V2 547 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 CCAR2Q8N163 923 aaKnown RBP18.46■□□□□ 0.55
PFDN6-201ENST00000374606 WDTC1Q8N5D0 677 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 STK32AQ8WU08 396 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 ZNF653Q96CK0 615 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 CDCA3Q99618 268 aaPredicted RBP18.46■□□□□ 0.55
PFDN6-201ENST00000374606 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 RXFP1Q9HBX9 757 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 FNIP2Q9P278 1114 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 CYTH4Q9UIA0 394 aa18.46■□□□□ 0.55
PFDN6-201ENST00000374606 CFAP54Q96N23 3096 aa18.46■□□□□ 0.54
PFDN6-201ENST00000374606 PTPRZ1P23471 2315 aaPredicted RBP18.45■□□□□ 0.54
PFDN6-201ENST00000374606 PER2O15055 1255 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 LILRB3O75022 631 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 SRGAP2BP0DMP2 458 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 MYBL1P10243 752 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 MSNP26038 577 aaKnown RBP18.45■□□□□ 0.54
PFDN6-201ENST00000374606 RGS7P49802 495 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 NUBP1P53384 320 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 MAP3K7CLP57077 242 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 SNX16P57768 344 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 FOXK2Q01167 660 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 KIF5AQ12840 1032 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 ARHGAP29Q52LW3 1261 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 LIN9Q5TKA1 542 aa18.45■□□□□ 0.54
PFDN6-201ENST00000374606 PLPP4Q5VZY2 271 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms