RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SAC3D1A6NKF1 404 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CLIC2O15247 247 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 OAZ1P54368 228 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 P3H1Q32P28 736 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 IZUMO3Q5VZ72 239 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 C16orf86Q6ZW13 317 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 DDIASQ8IXT1 998 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ZBED8Q8IZ13 594 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 FAM9CQ8IZT9 166 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PPHLN1Q8NEY8 458 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 MRPL48Q96GC5 212 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 MAGEB10Q96LZ2 347 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RIC8BQ9NVN3 520 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SFMBT1Q9UHJ3 866 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 APPL1Q9UKG1 709 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 EIF3HO15372 352 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ATG13O75143 517 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 IMPDH2P12268 514 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PSMA4P25789 261 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 VHLP40337 213 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 MRPS25P82663 173 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PRKCEQ02156 737 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 HABP4Q5JVS0 413 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RD3Q7Z3Z2 195 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 VPS50Q96JG6 964 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ZFP42Q96MM3 310 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 TRABDQ9H4I3 376 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RSAD1Q9HA92 442 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 POLMQ9NP87 494 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PRMT7Q9NVM4 692 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 MAD2L2Q9UI95 211 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 GABRQQ9UN88 632 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ITIH6Q6UXX5 1313 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 IGSF9BQ9UPX0 1349 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 NR3C1P04150 777 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ITIH2P19823 946 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SOX6P35712 828 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RABGGTBP53611 331 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ILF2Q12905 390 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RBBP7Q16576 425 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 P3H2Q8IVL5 708 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CCT7Q99832 543 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 FANCEQ9HB96 536 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SYTL2Q9HCH5 934 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 KRCC1Q9NPI7 259 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SMARCAL1Q9NZC9 954 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ZFATQ9P243 1243 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 WDR35Q9P2L0 1181 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PSMC3IPQ9P2W1 217 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 AURKCQ9UQB9 309 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 YDJCA8MPS7 323 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 H0YC42 278 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ARIH2O95376 493 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF699Q32M78 642 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 USP41Q3LFD5 358 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 FASTKD1Q53R41 847 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 METTL7BQ6UX53 244 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 TMC5Q6UXY8 1006 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 TSTD1Q8NFU3 115 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 HIC2Q96JB3 615 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 STRBPQ96SI9 672 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 FAM205AQ6ZU69 1335 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PXDNQ92626 1479 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF839A8K0R7 811 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SLC16A3O15427 465 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 AKAP10O43572 662 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SLC26A2P50443 739 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CNTN2Q02246 1040 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 MAPRE1Q15691 268 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 HIF1AQ16665 826 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PABPC1LQ4VXU2 614 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 BROXQ5VW32 411 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CCDC137Q6PK04 289 aaKnown RBP6.53□□□□□ -1.36
PTPN3-202ENST00000374541 PADI6Q6TGC4 694 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CLEC4FQ8N1N0 589 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 VPS37AQ8NEZ2 397 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 SUSD6Q92537 303 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 FAM20AQ96MK3 541 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 TIPINQ9BVW5 301 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 RAD21L1Q9H4I0 556 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 CDY1Q9Y6F8 540 aa6.53□□□□□ -1.36
PTPN3-202ENST00000374541 LRRC53A6NM62 1247 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 TK2O00142 265 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PRMT3O60678 531 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HIST1H2AGP0C0S8 130 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PRR29P0C7W0 189 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HIST1H2ADP20671 130 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HMOX2P30519 316 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF280AP59817 542 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ACTR2P61160 394 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MEI1Q5TIA1 1274 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HIST1H2AHQ96KK5 128 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HIST1H2AJQ99878 128 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms