RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.26
PRPF4-201ENST00000374198 SF3B1O75533 1304 aaKnown RBP eCLIP13.45□□□□□ -0.268e-6■■■■■ 107
PRPF4-201ENST00000374198 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 THRAP10827 490 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 THOC7Q6I9Y2 204 aaKnown RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 SLC2A7Q6PXP3 512 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 ITPKCQ96DU7 683 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 RILPQ96NA2 401 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 ACAP3Q96P50 834 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 SRPK1Q96SB4 655 aaKnown RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 TRPV5Q9NQA5 729 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 CDH22Q9UJ99 828 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 UTRNP46939 3433 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 FRMPD2Q68DX3 1309 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 LSM1O15116 133 aaKnown RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 BMP3P12645 472 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 ETS1P14921 441 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 GAP43P17677 238 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 GLRA2P23416 452 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 RPA1P27694 616 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 CDK18Q07002 472 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF423Q2M1K9 1284 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 RNASEH2BQ5TBB1 312 aaKnown RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-201ENST00000374198 SORCS3Q9UPU3 1222 aa13.45□□□□□ -0.26
PRPF4-201ENST00000374198 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
PRPF4-201ENST00000374198 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
PRPF4-201ENST00000374198 NUP107P57740 925 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SLC18A2Q05940 514 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 BST1Q10588 318 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
PRPF4-201ENST00000374198 CLPPQ16740 277 aaPredicted RBP13.44□□□□□ -0.26
PRPF4-201ENST00000374198 ANKDD1AQ495B1 522 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 PQLC1Q8N2U9 271 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SCAIQ8N9R8 606 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SHOC2Q9UQ13 582 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 TRIM17Q9Y577 477 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
PRPF4-201ENST00000374198 LIASO43766 372 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 KITP10721 976 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 BCAP31P51572 246 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 CETN1Q12798 172 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 LPCAT2Q7L5N7 544 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 SLFN12Q8IYM2 578 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 EYA3Q99504 573 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 TBC1D23Q9NUY8 699 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 HESX1Q9UBX0 185 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 CROTQ9UKG9 612 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 DNPEPQ9ULA0 475 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 MYH11P35749 1972 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 EMSYQ7Z589 1322 aa13.44□□□□□ -0.26
PRPF4-201ENST00000374198 GOLGA8SH3BPF8 625 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 GOLGA8MH3BSY2 632 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 HIF1AQ16665 826 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 SH2D5Q6ZV89 423 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 MYCT1Q8N699 235 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CASP10Q92851 521 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 DHRS1Q96LJ7 313 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 NEURL2Q9BR09 285 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 HAUS8Q9BT25 410 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 KLC2Q9H0B6 622 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 TSC22D4Q9Y3Q8 395 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 IQANK1A0A1B0GTG1 560 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 SDR42E2A6NKP2 422 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 PROCP04070 461 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF23P17027 643 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 NFKBIAP25963 317 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 PPARGP37231 505 aaPredicted RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 DLG4P78352 724 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 TMPRSS15P98073 1019 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 TCHHL1Q5QJ38 904 aaPredicted RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 ATG16L1Q676U5 607 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 HPS6Q86YV9 775 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 NEDD1Q8NHV4 660 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF395Q9H8N7 513 aaPredicted RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 LAMB2P55268 1798 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms