RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 PTK6Q13882 451 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 FAM183BPQ6ZVS7 135 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 ARL2BPQ9Y2Y0 163 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 DFFAO00273 331 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 CLDN5O00501 218 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 B3GAT3O94766 335 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 LSM8O95777 96 aaKnown RBP12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 CD302Q8IX05 232 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 MCUQ8NE86 351 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 SREK1Q8WXA9 508 aaKnown RBP12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 TUBGCP4Q9UGJ1 667 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 ZFP69BQ9UJL9 534 aa12.31□□□□□ -0.44
PACSIN1-202ENST00000374043 A0A1W2PPM1 405 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 MAP2K2P36507 400 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 SLC12A2P55011 1212 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 DEUP1Q05D60 604 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PHF13Q86YI8 300 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 MICAL1Q8TDZ2 1067 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 POMCP01189 267 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 EDN1P05305 212 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 HMBSP08397 361 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 GAD2Q05329 585 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 EFHC2Q5JST6 749 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PARK7Q99497 189 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 UNKQ9C0B0 810 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 ZDHHC18Q9NUE0 388 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 GRIN2DO15399 1336 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 TULP2O00295 520 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 LRCH4O75427 683 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 GEMIN4P57678 1058 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 OGDHQ02218 1023 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 ADIGQ0VDE8 80 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 CNGA2Q16280 664 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 SDCCAG8Q86SQ7 713 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 METTL23Q86XA0 190 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 CYP4X1Q8N118 509 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PGM2Q96G03 612 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
PACSIN1-202ENST00000374043 NDC80O14777 642 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 FBXO47Q5MNV8 452 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 NIFKQ9BYG3 293 aaKnown RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 DDIT4Q9NX09 232 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 STAP1Q9ULZ2 295 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 TNFSF13BQ9Y275 285 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 hCG_1818297A0A087WSY0 165 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 CYB561D2O14569 222 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 PYGBP11216 843 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 RPA3P35244 121 aaPredicted RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ARFIP2P53365 341 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 KDSRQ06136 332 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 SPOUT1Q5T280 376 aaKnown RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ANKRD22Q5VYY1 191 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ICE2Q659A1 982 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 PDZD4Q76G19 769 aaPredicted RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 RYBPQ8N488 228 aaPredicted RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 LPPQ93052 612 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ZNF560Q96MR9 790 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 RGS17Q9UGC6 210 aaPredicted RBP12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 HAO1Q9UJM8 370 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 KRT38O76015 456 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 MCF2P10911 925 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ADRA1DP25100 572 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 SLC26A2P50443 739 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 GDF10P55107 478 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ERMARDQ5T6L9 678 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 ABI1Q8IZP0 508 aa12.29□□□□□ -0.44
PACSIN1-202ENST00000374043 KIRREL3Q8IZU9 778 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms