RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 SLC29A2Q14542 456 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 RAD9BQ6WBX8 426 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 GPR141Q7Z602 305 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CCDC103Q8IW40 242 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CCL15-CCL14A0A0B4J2E2 113 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 SDR42E2A6NKP2 422 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 DDHD2O94830 711 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 VDRP11473 427 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 TCF7P36402 384 aaPredicted RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 PWP1Q13610 501 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 CCL15Q16663 113 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ZNF786Q8N393 782 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ZDHHC9Q9Y397 364 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 PRDM15P57071 1507 aaPredicted RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 HOXA2O43364 376 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 FYNP06241 537 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ITGALP20701 1170 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 RASA1P20936 1047 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 PKN2Q16513 984 aaKnown RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 RIN3Q8TB24 985 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 FAM111AQ96PZ2 611 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 EPS8L2Q9H6S3 715 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 DLGAP3O95886 979 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 CNTFP26441 200 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 KCNJ1P48048 391 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 TGM3Q08188 693 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 CASP10Q92851 521 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 TARS2Q9BW92 718 aaKnown RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 AP1G2O75843 785 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ZNF23P17027 643 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 CYP11B2P19099 503 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 AVPR1AP37288 418 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 CPA2P48052 419 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ZNF284Q2VY69 593 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 ZNF484Q5JVG2 852 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 GNASQ5JWF2 1037 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 IPPQ9Y573 584 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 E7ENQ6 273 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 DDX39BQ13838 428 aaKnown RBP11.93□□□□□ -0.5
VCL-202ENST00000372755 NCF4Q15080 339 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 LRRC6Q86X45 466 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 NAT9Q9BTE0 207 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 LRRC40Q9H9A6 602 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 NDUFA13Q9P0J0 144 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 PHTF1Q9UMS5 762 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 TSC22D4Q9Y3Q8 395 aa11.93□□□□□ -0.5
VCL-202ENST00000372755 GRIN3BO60391 1043 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 FBXO21O94952 628 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 TRIM16LQ309B1 348 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 DDHD1Q8NEL9 900 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 MAGEB18Q96M61 343 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 TRIM8Q9BZR9 551 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 UBXN6Q9BZV1 441 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 SKAP2O75563 359 aaPredicted RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 CRTAMO95727 393 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 RBP1P09455 135 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 MBL2P11226 248 aaPredicted RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 KLRC1P26715 233 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 KRT20P35900 424 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 FCGRTP55899 365 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 KPNB1Q14974 876 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 FAM180AQ6UWF9 173 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 WDR41Q9HAD4 459 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 GGA3Q9NZ52 723 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 GYPCP04921 128 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 ITIH4Q14624 930 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 GALNTL6Q49A17 601 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 PNKPQ96T60 521 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 CLPBQ9H078 707 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 CHST12Q9NRB3 414 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 AGPAT3Q9NRZ7 376 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 DSEQ9UL01 958 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 AXIN2Q9Y2T1 843 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 ZNF609O15014 1411 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 CNTNAP5Q8WYK1 1306 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 BNC2Q6ZN30 1099 aaPredicted RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 GJD4Q96KN9 370 aaPredicted RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 ZNF518BQ9C0D4 1074 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 SLC40A1Q9NP59 571 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 LNPEPQ9UIQ6 1025 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 OGTO15294 1046 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms