RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 GH2P01242 217 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 TFPTP0C1Z6 253 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 UNGP13051 313 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ITGB5P18084 799 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ANXA13P27216 316 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SMARCA1P28370 1054 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MFAP3P55082 362 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GEMIN4P57678 1058 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 BST1Q10588 318 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 TMED1Q13445 227 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MAMLD1Q13495 774 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PDK1Q15118 436 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PDCD2Q16342 344 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SLC10A5Q5PT55 438 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GPATCH4Q5T3I0 446 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 RNASEH2BQ5TBB1 312 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SLC39A4Q6P5W5 647 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 RBM44Q6ZP01 1051 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SCUBE1Q8IWY4 988 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CCDC89Q8N998 374 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 BANPQ8N9N5 519 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 LSM14AQ8ND56 463 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MZB1Q8WU39 189 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ZFAND2BQ8WV99 257 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CPT1BQ92523 772 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF668Q96K58 619 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ZBTB45Q96K62 511 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SENP7Q9BQF6 1050 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 OXCT2Q9BYC2 517 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GLIS2Q9BZE0 524 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GRIP2Q9C0E4 1043 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 KLHL4Q9C0H6 718 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 DBNDD1Q9H9R9 158 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 RAB20Q9NX57 234 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 NDE1Q9NXR1 346 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ZHX2Q9Y6X8 837 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MYH11P35749 1972 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ZNFX1Q9P2E3 1918 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 KBTBD13C9JR72 458 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 BOLA2-SMG1P6H3BVE0 249 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 IPO5O00410 1097 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CREB3O43889 395 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ATP5HO75947 161 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PROSCO94903 275 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MT-ND3P03897 115 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 FAM200BP0CF97 657 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 VAV1P15498 845 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GAP43P17677 238 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 TPP2P29144 1249 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SERPINB6P35237 376 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ELK3P41970 407 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 NSFP46459 744 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 RPIAP49247 311 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRELPP51888 382 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 YWHAGP61981 247 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR20EP86478 221 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR20CP86479 221 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR20DP86480 221 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR20BP86481 221 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR20AP86496 221 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 TMPRSS15P98073 1019 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PTK7Q13308 1070 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GRAPQ13588 217 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRKD1Q15139 912 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 TRIP10Q15642 601 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CHI3L2Q15782 390 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CCNG2Q16589 344 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 HIF1AQ16665 826 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GRAMD1BQ3KR37 738 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SH3PXD2AQ5TCZ1 1133 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 Q6ZNB5 142 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PPM1NQ8N819 430 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CEP70Q8NHQ1 597 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GRAPLQ8TC17 118 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 NAT14Q8WUY8 206 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 SLCO2A1Q92959 643 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MTBPQ96DY7 904 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 HSPBAP1Q96EW2 488 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 CSRNP1Q96S65 589 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 ARPC5LQ9BPX5 153 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 POLR3CQ9BUI4 534 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 NYXQ9GZU5 481 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 MMADHCQ9H3L0 296 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 APOBEC3GQ9HC16 384 aaKnown RBP5.66□□□□□ -1.5
ATG4A-204ENST00000372246 KMT5AQ9NQR1 393 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 UBAP1Q9NZ09 502 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 COL20A1Q9P218 1284 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 GGA1Q9UJY5 639 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PRR12Q9ULL5 1215 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 PLA2G4CQ9UP65 541 aa5.66□□□□□ -1.5
ATG4A-204ENST00000372246 A0A088AWK7 358 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 hCG_1984214I3L0E3 225 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 VILLO15195 856 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 PFDN1O60925 122 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 TRPA1O75762 1119 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 MTA2O94776 668 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms