RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 STAT3P40763 770 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 HSD17B4P51659 736 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 COG7P83436 770 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 SPIRE1Q08AE8 756 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 LRRC14Q15048 493 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PRR16Q569H4 304 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 WDR45BQ5MNZ6 344 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 SPOPLQ6IQ16 392 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 UBE2Q1Q7Z7E8 422 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 FAM20CQ8IXL6 584 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 LSMEM2Q8N112 164 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 SP7Q8TDD2 431 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 ARHGEF2Q92974 986 aaKnown RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 EME1Q96AY2 570 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 MAGEB18Q96M61 343 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 TSG101Q99816 390 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PARVGQ9HBI0 331 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 HOMER2Q9NSB8 354 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PPT2Q9UMR5 302 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PCDHA2Q9Y5H9 948 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 NOTOA8MTQ0 251 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 BUB1O43683 1085 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 DKC1O60832 514 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CLASP2O75122 1294 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 MED24O75448 989 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 IL2RAP01589 272 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TFAP2AP05549 437 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SLC5A2P31639 672 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SERPINB6P35237 376 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SREBF1P36956 1147 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 EIF2B2P49770 351 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 WASHC5Q12768 1159 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 PPP2R5CQ13362 524 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 MAN2A1Q16706 1144 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 FAM26FQ5R3K3 315 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SIGIRRQ6IA17 410 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF449Q6P9G9 518 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 VSTM1Q6UX27 236 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 GOLM1Q8NBJ4 401 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 GABPB2Q8TAK5 448 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CCDC110Q8TBZ0 833 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 LENG9Q96B70 501 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 EGLN2Q96KS0 407 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 BIRC8Q96P09 236 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 UNKQ9C0B0 810 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 EBF3Q9H4W6 596 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CDV3Q9UKY7 258 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SIK3Q9Y2K2 1263 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 MSRB2Q9Y3D2 182 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 STARD13Q9Y3M8 1113 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TMEM120BA0PK00 339 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 FAM86B1E9PN63 330 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CBX6O95503 412 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 FAM86B2P0C5J1 330 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 PCSK2P16519 638 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF12P17014 697 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 PPARGP37231 505 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 SLC12A3P55017 1021 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 FKBP3Q00688 224 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 KCNC4Q03721 635 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 ASPHQ12797 758 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 MED21Q13503 144 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TLR1Q15399 786 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 BOLA3Q53S33 107 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 KAZNQ674X7 775 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 GPBP1Q86WP2 473 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 CATSPER3Q86XQ3 398 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 ZFP28Q8NHY6 868 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TRPM4Q8TD43 1214 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
ATG4A-203ENST00000372232 PLK2Q9NYY3 685 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 THEGQ9P2T0 379 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF536O15090 1300 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 PITPNM2Q9BZ72 1349 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 RBAK-RBAKDNI3L0D1 243 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 EPHB6O15197 1021 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 GSC2O15499 205 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 FTCDO95954 541 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 CHRNB1P11230 501 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-203ENST00000372232 FSHRP23945 695 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 HOXA13P31271 388 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-203ENST00000372232 CIITAP33076 1130 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 ECE1P42892 770 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 CHN2P52757 468 aa9.22□□□□□ -0.93
ATG4A-203ENST00000372232 RNASE9P60153 205 aaKnown RBP9.22□□□□□ -0.93
ATG4A-203ENST00000372232 MOGSQ13724 837 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms