RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 AGTP01019 485 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 ESRRGP62508 458 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 NAA30Q147X3 362 aaPredicted RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 MRNIPQ6NTE8 343 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 RRM2BQ7LG56 351 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 C4orf33Q8N1A6 199 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TMEM199Q8N511 208 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 SMARCD1Q96GM5 515 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 THG1LQ9NWX6 298 aaKnown RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 USP18Q9UMW8 372 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 YWHAQP27348 245 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 PPP3CCP48454 512 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 INPP1P49441 399 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 FLT3LGP49771 235 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TFDP3Q5H9I0 405 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 DNAJC7Q99615 494 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TEX12Q9BXU0 123 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 DMAP1Q9NPF5 467 aaPredicted RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 SLC39A10Q9ULF5 831 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 SPDYE5A6NIY4 337 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TADA3O75528 432 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 CCL23P55773 120 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 SPDYE7PQ495Y7 208 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 PPM1LQ5SGD2 360 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 MAP4K3Q8IVH8 894 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 ZNF606Q8WXB4 792 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 IGFLR1Q9H665 355 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 ZMYM2Q9UBW7 1377 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 SMIM10L2AP0DMW4 78 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 SMIM10L2BP0DMW5 78 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 C6orf10Q5SRN2 563 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 CCDC33Q8N5R6 958 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
NDC1-201ENST00000371429 TGM2P21980 687 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 DENND5BQ6ZUT9 1274 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 ELOVL4Q9GZR5 314 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 SCUBE2Q9NQ36 999 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 RPS6KL1Q9Y6S9 549 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 LUC7L3O95232 432 aaKnown RBP15.28■□□□□ 0.04
NDC1-201ENST00000371429 ADIGQ0VDE8 80 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 STX3Q13277 289 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 HSP90AA5PQ58FG0 334 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 KCNF1Q9H3M0 494 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 E2F8A0AVK6 867 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 JCHAINP01591 159 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 MYL2P10916 166 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
NDC1-201ENST00000371429 STARD3Q14849 445 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 ZNF284Q2VY69 593 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
NDC1-201ENST00000371429 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 MEIS2O14770 477 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 MAP3K13O43283 966 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 FNTAP49354 379 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 SCNN1GP51170 649 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 TBX4P57082 545 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 YWHAZP63104 245 aaKnown RBP15.27■□□□□ 0.04
NDC1-201ENST00000371429 C1orf146Q5VVC0 180 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.04
NDC1-201ENST00000371429 FRMD8P1Q9BZ68 369 aaPredicted RBP15.27■□□□□ 0.04
NDC1-201ENST00000371429 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 CARNS1A5YM72 827 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 PROSCO94903 275 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 CDH8P55286 799 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 SLC39A12Q504Y0 691 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 GRAMD1AQ96CP6 724 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 RUBCNLQ9H714 662 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 RRN3Q9NYV6 651 aa15.27■□□□□ 0.04
NDC1-201ENST00000371429 AARS2Q5JTZ9 985 aaKnown RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 PPP4R4Q6NUP7 873 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 SLC2A14Q8TDB8 520 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 NDE1Q9NXR1 346 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 MSRAQ9UJ68 235 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 ANGPT2O15123 496 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 PSMD10O75832 226 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 CARSP49589 748 aaKnown RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 ABCE1P61221 599 aaKnown RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 MRPS6P82932 125 aaKnown RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 DGKZQ13574 1117 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 TREML2Q5T2D2 321 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 GJC2Q5T442 439 aaPredicted RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.03
NDC1-201ENST00000371429 MTBPQ96DY7 904 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 SENP8Q96LD8 212 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.03
NDC1-201ENST00000371429 BLOC1S4Q9NUP1 217 aa15.27■□□□□ 0.03
NDC1-201ENST00000371429 TRMT6Q9UJA5 497 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms