RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 DIS3L2Q8IYB7 885 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 PIGOQ8TEQ8 1089 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 AUTS2Q8WXX7 1259 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 VPS50Q96JG6 964 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 HSD17B14Q9BPX1 270 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SYT11Q9BT88 431 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 EMILIN2Q9BXX0 1053 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ZNF341Q9BYN7 854 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TRIM7Q9C029 511 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 REXO4Q9GZR2 422 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 RNF38Q9H0F5 515 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 KCNH6Q9H252 994 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 OLA1Q9NTK5 396 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 EVA1BQ9NVM1 165 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 DBR1Q9UK59 544 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 TLK1Q9UKI8 766 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CAB39Q9Y376 341 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 PCDHB6Q9Y5E3 794 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 PCDHGB6Q9Y5F9 930 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 KPNA7A9QM74 516 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 MEIS1O00470 390 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SPATA31C1P0DKV0 1188 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 HSPA1AP0DMV8 641 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 HSPA1BP0DMV9 641 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 GRIA2P42262 883 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CLCN4P51793 760 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SH3BGRP55822 239 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 SESN3P58005 492 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 DEUP1Q05D60 604 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 FAPQ12884 760 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 DPYSQ14117 519 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TRIP4Q15650 581 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 STK11Q15831 433 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 C15orf59Q2T9L4 293 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 CHADLQ6NUI6 762 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 MAMDC4Q6UXC1 1216 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SLC9A9Q8IVB4 645 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 INTS12Q96CB8 462 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 TM9SF2Q99805 663 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TIPINQ9BVW5 301 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 EMC7Q9NPA0 242 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 MORF4L1Q9UBU8 362 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.16□□□□□ -1.74
MCF2-203ENST00000370576 TEKT2Q9UIF3 430 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ASTN1O14525 1302 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 IGSF9BQ9UPX0 1349 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 NYNRINQ9P2P1 1898 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 KIAA1549LQ6ZVL6 1849 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 A0A0G2JPF8 293 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 A0A1W2PQJ5 194 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 BTBD18B2RXH4 712 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 HNRNPCL3B7ZW38 293 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SYT5O00445 386 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 AP1G1O43747 822 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 PIGRP01833 764 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 HNRNPCL4P0DMR1 293 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TROVE2P10155 538 aaKnown RBP eCLIP4.16□□□□□ -1.74
MCF2-203ENST00000370576 GNL1P36915 607 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 HAND2P61296 217 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 NR1I3Q14994 352 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 STXBP5Q5T5C0 1151 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CIAPIN1Q6FI81 312 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 LDHDQ86WU2 507 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CMIPQ8IY22 773 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SYTL1Q8IYJ3 562 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SCYL3Q8IZE3 742 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ABRAQ8N0Z2 381 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 RDH13Q8NBN7 331 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TOR1AIP2Q8NFQ8 470 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 CCDC12Q8WUD4 166 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 JADE3Q92613 823 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ZDHHC16Q969W1 377 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 TMIGD2Q96BF3 282 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 FAM20AQ96MK3 541 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SORBS1Q9BX66 1292 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 TWSG1Q9GZX9 223 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 NUP62CLQ9H1M0 184 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 BRMS1Q9HCU9 246 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 DMAC2Q9NW81 257 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 ZNF214Q9UL59 606 aaPredicted RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 CNOT6Q9ULM6 557 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 CLCA2Q9UQC9 943 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 STYXL1Q9Y6J8 313 aa4.16□□□□□ -1.74
MCF2-203ENST00000370576 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.16□□□□□ -1.74
MCF2-203ENST00000370576 CBX4O00257 560 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 PITPNM1O00562 1244 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 SYNCRIPO60506 623 aaKnown RBP4.15□□□□□ -1.74
MCF2-203ENST00000370576 NDUFB10O96000 172 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 TUBB4AP04350 444 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 CELA3AP09093 270 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 EEF2P13639 858 aaKnown RBP4.15□□□□□ -1.74
MCF2-203ENST00000370576 KCNA5P22460 613 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 TMOD1P28289 359 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 ADSSP30520 456 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 IGFALSP35858 605 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 MAP2K2P36507 400 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 GRIN1Q05586 938 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 ITIH3Q06033 890 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 TYRO3Q06418 890 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms