RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PCDHGC3Q9UN70 934 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 PDE4DIPQ5VU43 2346 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 GRXCR1A8MXD5 290 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 A8MXQ7 604 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 TLL1O43897 1013 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 GJB6O95452 261 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 ODC1P11926 461 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 CDH5P33151 784 aaPredicted RBP18.21■□□□□ 0.51
UBE3D-203ENST00000369747 FLT3P36888 993 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 RABGGTBP53611 331 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 CFAP58Q5T655 872 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 WDTC1Q8N5D0 677 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 C12orf29Q8N999 325 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 RAD9AQ99638 391 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 LPIN3Q9BQK8 851 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 NT5C1AQ9BXI3 368 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 TRIM31Q9BZY9 425 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 PARVAQ9NVD7 372 aa18.21■□□□□ 0.51
UBE3D-203ENST00000369747 TSC2P49815 1807 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 TCRBV5S1A1TA0A578 114 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 GABRDO14764 452 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 FSCN2O14926 492 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 OPA1O60313 960 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 LINC00271P0C7V0 271 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 WARSP23381 471 aaKnown RBP18.2■□□□□ 0.5
UBE3D-203ENST00000369747 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
UBE3D-203ENST00000369747 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
UBE3D-203ENST00000369747 CDR1P51861 262 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 CCDC137Q6PK04 289 aaKnown RBP18.2■□□□□ 0.5
UBE3D-203ENST00000369747 ACOT1Q86TX2 421 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 C12orf50Q8NA57 414 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-203ENST00000369747 TMEM35BQ8NCS4 154 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 TMEM176AQ96HP8 235 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 RUFY1Q96T51 708 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 PLVAPQ9BX97 442 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 ZNF518BQ9C0D4 1074 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 SNX25Q9H3E2 840 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 MTUS1Q9ULD2 1270 aa18.2■□□□□ 0.5
UBE3D-203ENST00000369747 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 O00370 1275 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 CALB1P05937 261 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 CCDC142Q17RM4 750 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 FEZF2Q8TBJ5 459 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 GDF15Q99988 308 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 FAM124BQ9H5Z6 455 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 DDX43Q9NXZ2 648 aaKnown RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 VWA8A3KMH1 1905 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 GOLGA8KD6RF30 607 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 PSTPIP1O43586 416 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 TRAPPC3O43617 180 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 ATP2C2O75185 946 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 CYP11A1P05108 521 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 MYOGP15173 224 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 CD19P15391 556 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 PAX3P23760 479 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 COILP38432 576 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 TAS2R40P59535 323 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 RPL7AP62424 266 aaKnown RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 FUT10Q6P4F1 479 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 TAS1R1Q7RTX1 841 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 UNC93AQ86WB7 457 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 TMEM86AQ8N2M4 240 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 FIBCD1Q8N539 461 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 TTC39CQ8N584 583 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 HEXIM2Q96MH2 286 aaKnown RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
UBE3D-203ENST00000369747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
UBE3D-203ENST00000369747 SF3B1O75533 1304 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■■■■■ 124.8
UBE3D-203ENST00000369747 PAEPP09466 180 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 MAN1A1P33908 653 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 HSD17B3P37058 310 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 DRG2P55039 364 aaKnown RBP18.18■□□□□ 0.5
UBE3D-203ENST00000369747 PSMC1P62191 440 aaKnown RBP18.18■□□□□ 0.5
UBE3D-203ENST00000369747 LLGL1Q15334 1064 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 TTMPQ5BVD1 217 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 COLGALT1Q8NBJ5 622 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 LRRC45Q96CN5 670 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 HERPUD2Q9BSE4 406 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 LRRC19Q9H756 370 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 ZDHHC18Q9NUE0 388 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
UBE3D-203ENST00000369747 TMEM191CA6NGB0 347 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 KRT14P02533 472 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 LAG3P18627 525 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 LHX1P48742 406 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 FNTAP49354 379 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 OVOS1Q6IE37 1185 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 DENND1BQ6P3S1 775 aa18.17■□□□□ 0.5
UBE3D-203ENST00000369747 RHOT1Q8IXI2 618 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms