RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PRICKLE1Q96MT3 831 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 EHD4Q9H223 541 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NDST4Q9H3R1 872 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 NPDC1Q9NQX5 325 aaPredicted RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TMEM39AQ9NV64 488 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 CTTNBP2NLQ9P2B4 639 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RPL26L1Q9UNX3 145 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 IQANK1A0A1B0GTG1 560 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KANSL1LA0AUZ9 987 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 B2RBV5 119 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 GOLGA8MH3BSY2 632 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 H7C0S8 307 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MEN1O00255 615 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KRIT1O00522 736 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MAPK13O15264 365 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 TXNL1O43396 289 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 UBL4AP11441 157 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MYL6BP14649 208 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 HPGDP15428 266 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 DDX5P17844 614 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ATP6V1C1P21283 382 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SOX5P35711 763 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 GRIK1P39086 918 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PPP1R2P41236 205 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 STAT6P42226 847 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CLCN4P51793 760 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 COG7P83436 770 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KLC1Q07866 573 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 C19orf57Q0VDD7 668 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CETN1Q12798 172 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 NNTQ13423 1086 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 DSG2Q14126 1118 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 NR6A1Q15406 480 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 STK11Q15831 433 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 STX1AQ16623 288 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF528Q3MIS6 628 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 DEPDC1Q5TB30 811 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PPP1R2P3Q6NXS1 205 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MARK2Q7KZI7 788 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ARFGAP2Q8N6H7 521 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RIN3Q8TB24 985 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 FBXO30Q8TB52 745 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ATP8B4Q8TF62 1192 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CENPIQ92674 756 aaPredicted RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ACAP3Q96P50 834 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CDCA3Q99618 268 aaPredicted RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SRCIN1Q9C0H9 1055 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 EPB41L1Q9H4G0 881 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 BMP2KQ9NSY1 1161 aaPredicted RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 HSPBP1Q9NZL4 362 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 DPP7Q9UHL4 492 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SESN1Q9Y6P5 492 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 NUMBLQ9Y6R0 609 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 A0A1W2PPH5 198 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 B4E171 279 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 M0R296 226 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MATN2O00339 956 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SRGAP2O75044 1071 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 YEATS4O95619 227 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 F13A1P00488 732 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 IFNB1P01574 187 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RPLP2P05387 115 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RARBP10826 455 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CKMT1AP12532 417 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KRT4P19013 534 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RXRAP19793 462 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ABCB4P21439 1286 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PTGS2P35354 604 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ADCY8P40145 1251 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SCTRP47872 440 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 HNMTP50135 292 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 PMS1P54277 932 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 BACE1P56817 501 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 HERVK_113P62684 666 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ZXDAP98168 799 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KDSRQ06136 332 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 GBX1Q14549 363 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 GLE1Q53GS7 698 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 MDH1BQ5I0G3 518 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 FAM26DQ5JW98 314 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 GRAMD4Q6IC98 578 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RPUSD3Q6P087 351 aaKnown RBP5.31□□□□□ -1.56
UBE3D-202ENST00000369746 BRICD5Q6PL45 260 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SLC22A25Q6T423 547 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 B3GNT6Q6ZMB0 384 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 NLRP8Q86W28 1048 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SLC22A9Q8IVM8 553 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 CD302Q8IX05 232 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 ZSCAN1Q8NBB4 408 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SLC7A3Q8WY07 619 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 FAM89AQ96GI7 184 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 BCL7BQ9BQE9 202 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 HGH1Q9BTY7 390 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 SPON2Q9BUD6 331 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 EMILIN2Q9BXX0 1053 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 TMEM39BQ9GZU3 492 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KIAA1683Q9H0B3 1180 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 KCNMB3Q9NPA1 279 aa5.31□□□□□ -1.56
UBE3D-202ENST00000369746 RPRD1BQ9NQG5 326 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms