RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PTK7Q13308 1070 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 UBAP2LQ14157 1087 aaKnown RBP13.48□□□□□ -0.25
CHD1L-202ENST00000369258 HSF5Q4G112 596 aaPredicted RBP13.48□□□□□ -0.25
CHD1L-202ENST00000369258 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
CHD1L-202ENST00000369258 HACE1Q8IYU2 909 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 EBF4Q9BQW3 602 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 VPS11Q9H270 941 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 PCDH9Q9HC56 1237 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 ANKEF1Q9NU02 776 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
CHD1L-202ENST00000369258 C2CD2Q9Y426 696 aa13.48□□□□□ -0.25
CHD1L-202ENST00000369258 MKI67P46013 3256 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 NDC80O14777 642 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 TM9SF1O15321 606 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 MT-ND3P03897 115 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 MCL1Q07820 350 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 CCDC142Q17RM4 750 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 FOXB2Q5VYV0 432 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 NIPA1Q7RTP0 329 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SAMD7Q7Z3H4 446 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 DCAKDQ8WVC6 231 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 FAM136AQ96C01 138 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 PTCD3Q96EY7 689 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 CEP41Q9BYV8 373 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 B4GALT5O43286 388 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 PSMG1O95456 288 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 HMGCS2P54868 508 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 INHBEP58166 350 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 C16orf46Q6P387 395 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 AGR3Q8TD06 166 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 CCDC124Q96CT7 223 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SYNCQ9H7C4 482 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 MTO1Q9Y2Z2 717 aaKnown RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 LY75O60449 1722 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ZMPSTE24O75844 475 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 RBP3P10745 1247 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ETS2P15036 469 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 KCNA2P16389 499 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 OCRLQ01968 901 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 RSBN1LQ6PCB5 846 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 BANPQ8N9N5 519 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-202ENST00000369258 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
CHD1L-202ENST00000369258 B2RBV5 119 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 PLSCR1O15162 318 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 ITGAVP06756 1048 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 GARTP22102 1010 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 PHKA2P46019 1235 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 CDK16Q00536 496 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 BSPRYQ5W0U4 402 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 CWF19L1Q69YN2 538 aaKnown RBP13.46□□□□□ -0.25
CHD1L-202ENST00000369258 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
CHD1L-202ENST00000369258 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 ACSS3Q9H6R3 686 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 PPARGC1AQ9UBK2 798 aaKnown RBP13.46□□□□□ -0.25
CHD1L-202ENST00000369258 ASB3Q9Y575 518 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
CHD1L-202ENST00000369258 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 TRIM49D1C9J1S8 452 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 FCHO1O14526 889 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 MAP3K7O43318 606 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 ASNSP08243 561 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 RXRBP28702 533 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 JAK3P52333 1124 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 EIF3EP60228 445 aaKnown RBP13.46□□□□□ -0.26
CHD1L-202ENST00000369258 PSMC1P62191 440 aaKnown RBP13.46□□□□□ -0.26
CHD1L-202ENST00000369258 ROR2Q01974 943 aaKnown RBP13.46□□□□□ -0.26
CHD1L-202ENST00000369258 MFN1Q8IWA4 741 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 PPIL6Q8IXY8 311 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 MPP5Q8N3R9 675 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.46□□□□□ -0.26
CHD1L-202ENST00000369258 SAMD3Q8N6K7 520 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 MZB1Q8WU39 189 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 THTPAQ9BU02 230 aa13.46□□□□□ -0.26
CHD1L-202ENST00000369258 IKBKGQ9Y6K9 419 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms