RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RAB6CQ9H0N0 254 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 CASP8AP2Q9UKL3 1982 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 A8MXQ7 604 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 F8VP50 259 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 FKTNO75072 461 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 MICAL2O94851 1124 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 FGFR1P11362 822 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CENPCQ03188 943 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CLUL1Q15846 466 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CDO1Q16878 200 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 PPP1R26Q5T8A7 1209 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 GKAP1Q5VSY0 366 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 KAZNQ674X7 775 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 TTC27Q6P3X3 843 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 NDRG1Q92597 394 aaKnown RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 WNT8AQ9H1J5 351 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 C2CD2Q9Y426 696 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CLDN5O00501 218 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 SMIM24O75264 130 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CILPO75339 1184 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CYP1A2P05177 515 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 TUBP50607 506 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CLCNKBP51801 687 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 TAS2R40P59535 323 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 OGDHQ02218 1023 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 MAMLD1Q13495 774 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 TAF5Q15542 800 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 SOWAHAQ2M3V2 549 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 KCNT1Q5JUK3 1230 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CCSAPQ6IQ19 270 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 C11orf63Q6NUN7 778 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 SLC30A9Q6PML9 568 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 JOSD2Q8TAC2 188 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 RPS6KC1Q96S38 1066 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 B3GNT5Q9BYG0 378 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 SLC12A6Q9UHW9 1150 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 TSPAN16Q9UKR8 245 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 ITGA11Q9UKX5 1188 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 A0A1W2PQ45 241 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 A0A1W2PQY0 241 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 PQBP1O60828 265 aaKnown RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 PPFIA2O75334 1257 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 ACSL3O95573 720 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 PDHA1P08559 390 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 RARAP10276 462 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 HSPA6P17066 643 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 CTCFP49711 727 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 LPIN1Q14693 890 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 SGO2Q562F6 1265 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
TPM3-212ENST00000368533 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 BCO2Q9BYV7 579 aa11.17□□□□□ -0.62
TPM3-212ENST00000368533 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 PODXLO00592 558 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ERBB2P04626 1255 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 VIMP08670 466 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 FBXO47Q5MNV8 452 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 LHX8Q68G74 356 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 DNAJC24Q6P3W2 148 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 PCSK9Q8NBP7 692 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 TMEM35BQ8NCS4 154 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 DYDC1Q8WWB3 177 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ATG4AQ8WYN0 398 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 HAUS1Q96CS2 278 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 UPF3AQ9H1J1 476 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 PAPOLBQ9NRJ5 636 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 METTL5Q9NRN9 209 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 PCSK1NQ9UHG2 260 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 PDE4DIPQ5VU43 2346 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 TET1Q8NFU7 2136 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ARL5CA6NH57 179 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ECEL1O95672 775 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 CHN1P15882 459 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 COILP38432 576 aaPredicted RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 BCAR1P56945 870 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 UBAP2Q5T6F2 1119 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 LIN9Q5TKA1 542 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 AGMOQ6ZNB7 445 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 ZDHHC14Q8IZN3 488 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 EPS8L3Q8TE67 593 aaKnown RBP11.16□□□□□ -0.62
TPM3-212ENST00000368533 CLEC4CQ8WTT0 213 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 HERPUD2Q9BSE4 406 aa11.16□□□□□ -0.62
TPM3-212ENST00000368533 OSBPL1AQ9BXW6 950 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms