RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 SKILP12757 684 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 PTPN2P17706 415 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 TNFAIP3P21580 790 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 FSHRP23945 695 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 GSDMDP57764 484 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 CDR2Q01850 454 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 IFRD2Q12894 506 aaPredicted RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 DDR2Q16832 855 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 DENND1BQ6P3S1 775 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 ANKRD52Q8NB46 1076 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 GIPC2Q8TF65 315 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 SECISBP2LQ93073 1101 aaKnown RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 AGPAT1Q99943 283 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 DUSP16Q9BY84 665 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 SYNCQ9H7C4 482 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 ST7Q9NRC1 585 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 DNMT3BQ9UBC3 853 aaKnown RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 NOCTQ9UK39 431 aaKnown RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
EFNA1-201ENST00000368406 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
EFNA1-201ENST00000368406 MYO16Q9Y6X6 1858 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 FAM170AA1A519 330 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 GPR15P49685 360 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 PDE4CQ08493 712 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
EFNA1-201ENST00000368406 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
EFNA1-201ENST00000368406 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 CLEC20AQ6ZU45 233 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 ITIH5Q86UX2 942 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 TTC30AQ86WT1 665 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 GPR152Q8TDT2 470 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 EPS15L1Q9UBC2 864 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 PCDHGC3Q9UN70 934 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 MAGED2Q9UNF1 606 aaPredicted RBP13.36□□□□□ -0.27
EFNA1-201ENST00000368406 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 NOTCH4Q99466 2003 aa13.36□□□□□ -0.27
EFNA1-201ENST00000368406 ZNF197O14709 1029 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 XPO1O14980 1071 aaKnown RBP13.35□□□□□ -0.27
EFNA1-201ENST00000368406 NRDCO43847 1150 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 LSM8O95777 96 aaKnown RBP13.35□□□□□ -0.27
EFNA1-201ENST00000368406 RHOP08100 348 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 ALADP13716 330 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 PRKCIP41743 596 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 RGS7P49802 495 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 EPHA5P54756 1037 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 PAQR9Q6ZVX9 377 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
EFNA1-201ENST00000368406 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
EFNA1-201ENST00000368406 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 SMOQ99835 787 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 ZSWIM1Q9BR11 485 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 DOCK8Q8NF50 2099 aa13.35□□□□□ -0.27
EFNA1-201ENST00000368406 MYO10Q9HD67 2058 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 PI4K2BG5E9Z4 385 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CFHP08603 1231 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CSH1P0DML2 217 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CSH2P0DML3 217 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 LAMP2P13473 410 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 ATF6P18850 670 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
EFNA1-201ENST00000368406 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
EFNA1-201ENST00000368406 SNX16P57768 344 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 NTHL1P78549 312 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 FMO1Q01740 532 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 MEA1Q16626 185 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CCDC42Q96M95 316 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 PANX2Q96RD6 677 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 MYADMQ96S97 322 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 CDH7Q9ULB5 785 aa13.34□□□□□ -0.27
EFNA1-201ENST00000368406 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.28
EFNA1-201ENST00000368406 PIK3R2O00459 728 aa13.33□□□□□ -0.28
EFNA1-201ENST00000368406 DCXO43602 365 aa13.33□□□□□ -0.28
EFNA1-201ENST00000368406 AKR1B10O60218 316 aa13.33□□□□□ -0.28
EFNA1-201ENST00000368406 BEST1O76090 585 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms