RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ZNF189O75820 626 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 CCNE2O96020 404 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 F9P00740 461 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 PRKCIP41743 596 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 LHX1P48742 406 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ADAM32Q8TC27 787 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SH3BP1Q9Y3L3 701 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 MRPL42Q9Y6G3 142 aaKnown RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 KIF3CO14782 793 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ZNF263O14978 683 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 AADACL2Q6P093 401 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SGF29Q96ES7 293 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 F8VP50 259 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 PDE2AO00408 941 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 CCDC22O60826 627 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 PGK1P00558 417 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 JCHAINP01591 159 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 NFICP08651 508 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 HSDL1Q3SXM5 330 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ARMC2Q8NEN0 867 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 H3BQF6 201 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 B4GALT5O43286 388 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 SERPINB12Q96P63 405 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 WHRNQ9P202 907 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-203ENST00000368207 LMO7Q8WWI1 1683 aa12.78□□□□□ -0.36
PTPRK-203ENST00000368207 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ENO1P06733 434 aaKnown RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 FAM153BP0C7A2 387 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 TGM2P21980 687 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 NPY5RQ15761 445 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 FAM153CQ494X1 144 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ZNF410Q86VK4 478 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 LCA5Q86VQ0 697 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 CDT1Q9H211 546 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 UBP1Q9NZI7 540 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 NFASCO94856 1347 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 E5RJQ4 531 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 KPNA6O60684 536 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 SETSIPP0DME0 302 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 EIF4BP23588 611 aaKnown RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 HYIQ5T013 277 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.36
PTPRK-203ENST00000368207 PCDHA3Q9Y5H8 950 aa12.77□□□□□ -0.36
PTPRK-203ENST00000368207 MROH7Q68CQ1 1323 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PLA2G6O60733 806 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PEX19P40855 299 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PTGISQ16647 500 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
PTPRK-203ENST00000368207 SLC9A9Q8IVB4 645 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PIP4K2CQ8TBX8 421 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 COL20A1Q9P218 1284 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PCDHGC5Q9Y5F6 944 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 CASZ1Q86V15 1759 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 PQBP1O60828 265 aaKnown RBP12.77□□□□□ -0.37
PTPRK-203ENST00000368207 CYP2F1P24903 491 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 BFSP2Q13515 415 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 CUL3Q13618 768 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.37
PTPRK-203ENST00000368207 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 STK25O00506 426 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 ENDOD1O94919 500 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 KCNA2P16389 499 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 GCKP35557 465 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 EFTUD2Q15029 972 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms