RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 DARS2Q6PI48 645 aaKnown RBP14.93□□□□□ -0.02
CD48-201ENST00000368045 C4orf22Q6V702 233 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 NLRP9Q7RTR0 991 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 ZNF276Q8N554 614 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 MAB21L3Q8N8X9 362 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 CFAP61Q8NHU2 1237 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 TRPM4Q8TD43 1214 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 TCP10LQ8TDR4 215 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 HSPH1Q92598 858 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 USP6NLQ92738 828 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 RTP4Q96DX8 246 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 NLRP4Q96MN2 994 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 CALN1Q9BXU9 219 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 SMYD3Q9H7B4 428 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 TLE6Q9H808 572 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 PAK5Q9P286 719 aa14.93□□□□□ -0.02
CD48-201ENST00000368045 LOC102724159A0A0B4J2E5 919 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 A8MUI8 341 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 SOCS7O14512 581 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 DPYSL4O14531 572 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 B4GALT5O43286 388 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 ARIH2O95376 493 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 NFICP08651 508 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 GSTA2P09210 222 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 T-ENOLP0DO92 83 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 NEK3P51956 506 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 CDH8P55286 799 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 SLC18A2Q05940 514 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 INCA1Q0VD86 236 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 PWP2Q15269 919 aaKnown RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 HSDL1Q3SXM5 330 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 FAM102AQ5T9C2 384 aaPredicted RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 ILDR2Q71H61 639 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 IFNLR1Q8IU57 520 aaPredicted RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 DHX37Q8IY37 1157 aaKnown RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 CEP120Q8N960 986 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 SLC7A6OSQ96CW6 309 aaPredicted RBP14.92□□□□□ -0.02
CD48-201ENST00000368045 APOPT1Q96IL0 206 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 TRIM55Q9BYV6 548 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 MANSC1Q9H8J5 431 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 C10orf88Q9H8K7 445 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 ZFP69BQ9UJL9 534 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 TEX264Q9Y6I9 313 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 WDR90Q96KV7 1748 aa14.92□□□□□ -0.02
CD48-201ENST00000368045 C2CD4BA6NLJ0 364 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 IRF6O14896 467 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 HGSO14964 777 aaPredicted RBP14.91□□□□□ -0.02
CD48-201ENST00000368045 INHBAP08476 426 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 FGFR1P11362 822 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 TGM2P21980 687 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
CD48-201ENST00000368045 PTPN4P29074 926 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 ELK3P41970 407 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 CLNS1AP54105 237 aaKnown RBP14.91□□□□□ -0.02
CD48-201ENST00000368045 CDH6P55285 790 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 OSTNP61366 133 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 PTK7Q13308 1070 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 VGLL4Q14135 290 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 CRYMQ14894 314 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 EFCAB12Q6NXP0 572 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 LCLAT1Q6UWP7 414 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 TEKT4Q8WW24 435 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 TWNKQ96RR1 684 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 GPRC5DQ9NZD1 345 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 HAO1Q9UJM8 370 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
CD48-201ENST00000368045 CHMP2BQ9UQN3 213 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 LRRC37A2A6NM11 1700 aa14.91□□□□□ -0.02
CD48-201ENST00000368045 ZNF487B1APH4 448 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 GPR25O00155 361 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 PRPSAP2O60256 369 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 LPXNO60711 386 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 DNAJC6O75061 913 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 ITGB3P05106 788 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 MAGEA6P43360 314 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 PSMC4P43686 418 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 BOLA3Q53S33 107 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 ZNF484Q5JVG2 852 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 CLNKQ7Z7G1 428 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 NT5DC4Q86YG4 428 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 AFG1LQ8WV93 481 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 THOC1Q96FV9 657 aaKnown RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 HEXIM2Q96MH2 286 aaKnown RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TBCBQ99426 244 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 RNPEPL1Q9HAU8 725 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 NPHS2Q9NP85 383 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.9□□□□□ -0.02
CD48-201ENST00000368045 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms