RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DPYSL4O14531 572 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 CHKAP35790 457 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 VPS41P49754 854 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 PDK2Q15119 407 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 SKIDA1Q1XH10 827 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 CENPUQ71F23 418 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 ANKS1BQ7Z6G8 1248 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 XPO6Q96QU8 1125 aaKnown RBP14.69□□□□□ -0.06
USF1-202ENST00000368020 SELENOSQ9BQE4 189 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 MTG1Q9BT17 334 aaPredicted RBP14.69□□□□□ -0.06
USF1-202ENST00000368020 ZWILCHQ9H900 591 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
USF1-202ENST00000368020 MYADML2A6NDP7 307 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 C5orf60A6NFR6 353 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 C2CD4BA6NLJ0 364 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 DCDC2CA8MYV0 355 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 MCF2LO15068 1137 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 PRPSAP2O60256 369 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 CST8O60676 142 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 CABYRO75952 493 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 TRUB2O95900 331 aaKnown RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 MYL3P08590 195 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 CYP3A5P20815 502 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 MIPP30301 263 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 MAGEA4P43358 317 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 IRX5P78411 483 aaPredicted RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 GPS1Q13098 491 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 GOLGA7BQ2TAP0 167 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 BOLA3Q53S33 107 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 ARHGAP17Q68EM7 881 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 ALKAL1Q6UXT8 129 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 ARCQ7LC44 396 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 TEKT4Q8WW24 435 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 RSAD2Q8WXG1 361 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 P3H4Q92791 437 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 ARMC5Q96C12 935 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 CHMP6Q96FZ7 201 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 DDX23Q9BUQ8 820 aaKnown RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 NSRP1Q9H0G5 558 aaKnown RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 FAM49AQ9H0Q0 323 aaPredicted RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 INTS9Q9NV88 658 aaKnown RBP14.68□□□□□ -0.06
USF1-202ENST00000368020 SNTG2Q9NY99 539 aa14.68□□□□□ -0.06
USF1-202ENST00000368020 CENPFP49454 3210 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 SMIM23A6NLE4 172 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 FAM163BP0C2L3 166 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 KCNE1P15382 129 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 CHN1P15882 459 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 STIP1P31948 543 aaKnown RBP14.67□□□□□ -0.06
USF1-202ENST00000368020 PSEN2P49810 448 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 KCNA10Q16322 511 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 KYNUQ16719 465 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 GKAP1Q5VSY0 366 aaPredicted RBP14.67□□□□□ -0.06
USF1-202ENST00000368020 TXNRD3NBQ6F5E7 133 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 OR6B2Q6IFH4 312 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 TMEM110Q86TL2 294 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 PPIL6Q8IXY8 311 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 ACTL9Q8TC94 416 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 UNC93B1Q9H1C4 597 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 ADAM7Q9H2U9 754 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 SNX9Q9Y5X1 595 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 FAM169AQ9Y6X4 670 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 KIAA0100Q14667 2235 aaKnown RBP14.67□□□□□ -0.06
USF1-202ENST00000368020 FRMPD3Q5JV73 1810 aa14.67□□□□□ -0.06
USF1-202ENST00000368020 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 E5RJQ4 531 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 ENDOD1O94919 500 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 RPLP2P05387 115 aaKnown RBP14.66□□□□□ -0.06
USF1-202ENST00000368020 ASGR1P07306 291 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 PDGFRAP16234 1089 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 IL1R2P27930 398 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 ACADSBP45954 432 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 ADAM17P78536 824 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 OTUD4Q01804 1114 aaKnown RBP14.66□□□□□ -0.06
USF1-202ENST00000368020 ORC1Q13415 861 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 RASA2Q15283 850 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 PKDCCQ504Y2 493 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 FBXO47Q5MNV8 452 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 RNASEH2BQ5TBB1 312 aaKnown RBP14.66□□□□□ -0.06
USF1-202ENST00000368020 C9orf57Q5W0N0 161 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 TDRPQ86YL5 185 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 RFX6Q8HWS3 928 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 ARFGAP1Q8N6T3 406 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 EMC1Q8N766 993 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 ARHGEF2Q92974 986 aaKnown RBP14.66□□□□□ -0.06
USF1-202ENST00000368020 ZNF333Q96JL9 665 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 OSMRQ99650 979 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 UBN1Q9NPG3 1134 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 GDAP2Q9NXN4 497 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 SENP1Q9P0U3 644 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 FETUBQ9UGM5 382 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 RECQL4O94761 1208 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 CCL5P13501 91 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 TSHRP16473 764 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 HOXC8P31273 242 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 SDC4P31431 198 aa14.66□□□□□ -0.06
USF1-202ENST00000368020 PHBP35232 272 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms