RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 LYPLA1O75608 230 aaPredicted RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 GMPRP36959 345 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 PHKA2P46019 1235 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 CNTN2Q02246 1040 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 LAMB3Q13751 1172 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 NSUN6Q8TEA1 469 aaKnown RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 TFAP2BQ92481 460 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 MIPEPQ99797 713 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 AVENQ9NQS1 362 aaPredicted RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 SLC17A6Q9P2U8 582 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 hCG_1818297A0A087WSY0 165 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 PSMG1O95456 288 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 OAS1P00973 400 aaKnown RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 ATP6V1C1P21283 382 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 RAB27AP51159 221 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 NCKAP1LP55160 1127 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 BST1Q10588 318 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 ASRGL1Q7L266 308 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 IGDCC3Q8IVU1 814 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 RIBC1Q8N443 379 aaPredicted RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 PPP4R1Q8TF05 950 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 DHX35Q9H5Z1 703 aaKnown RBP11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 ARFGEF1Q9Y6D6 1849 aa11.5□□□□□ -0.57
NECTIN4-201ENST00000368012 GOLGA8QA0A0J9YX86 632 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 TCRBV9S1A1TA0A576 114 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 GOLGA8OA6NCC3 632 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 GOLGA8NF8WBI6 632 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 ALOX15BO15296 676 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 VNN1O95497 513 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 KRT7P08729 469 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 ATP6V1B1P15313 513 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 SLC34A1Q06495 639 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 ASPHQ12797 758 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 TRIP10Q15642 601 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 TRIM72Q6ZMU5 477 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 FBXO27Q8NI29 283 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 C7orf43Q8WVR3 580 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 PGBD4Q96DM1 585 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 MFSD14AQ96MC6 490 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 AK5Q9Y6K8 562 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 MIPP30301 263 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 NEK3P51956 506 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 STX3Q13277 289 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 CUL3Q13618 768 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 NFIL3Q16649 462 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 SLC45A4Q5BKX6 768 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 RNASEH2BQ5TBB1 312 aaKnown RBP11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 DCLK2Q8N568 766 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 WRNIP1Q96S55 665 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 PCDH9Q9HC56 1237 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 MAN1C1Q9NR34 630 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 UBIAD1Q9Y5Z9 338 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 TMEM191CA6NGB0 347 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 MTA2O94776 668 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 KLRC2P26717 231 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 IL1R2P27930 398 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 DENND5BQ6ZUT9 1274 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 GSTCDQ8NEC7 633 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 ANKRD36BP1Q96IX9 119 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 LGALS13Q9UHV8 139 aa11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 MTO1Q9Y2Z2 717 aaKnown RBP11.49□□□□□ -0.57
NECTIN4-201ENST00000368012 PRR5-ARHGAP8B1AHC4 643 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 LMNAP02545 664 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 RBL1P28749 1068 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 SOX11P35716 441 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 GTF2A2P52657 109 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 UNC5BQ8IZJ1 945 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 B4GALNT2Q8NHY0 566 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ATP8B3O60423 1300 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CLUHO75153 1309 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 A0A0B4J269 797 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 C2CD2LO14523 706 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 AIM2O14862 343 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 DESP17661 470 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 MMP8P22894 467 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms