RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 C15orf38-AP3S2A0A0A6YYH1 394 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SERPINE1P05121 402 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 CRABP2P29373 138 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 RPS6P62753 249 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 GPAT2Q6NUI2 795 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 LVRNQ6Q4G3 990 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 ARPINQ7Z6K5 226 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 LRRC52Q8N7C0 313 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 PPP1R14BQ96C90 147 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 TMEM176AQ96HP8 235 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 MCEEQ96PE7 176 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 PNPLA8Q9NP80 782 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 CYP39A1Q9NYL5 469 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.59□□□□□ -1.19
VTA1-202ENST00000367630 PRPF19Q9UMS4 504 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 IGLV3-22A0A075B6J6 115 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 A0A087X1B8 175 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 C16orf96A6NNT2 1141 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 B4GALT4O60513 344 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ESRRBO95718 433 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 LHX1P48742 406 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PTPN21Q16825 1174 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ARSHQ5FYA8 562 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SH2D3CQ8N5H7 860 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 TSEN2Q8NCE0 465 aaKnown RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 APPL2Q8NEU8 664 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 TBC1D13Q9NVG8 400 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 GJA3Q9Y6H8 435 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 C3orf70A6NLC5 250 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 DPYSL4O14531 572 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MAGEC1O60732 1142 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 RARAP10276 462 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 COPAP53621 1224 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 FMO1Q01740 532 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 AP1B1Q10567 949 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 BAATQ14032 418 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 ZC2HC1CQ53FD0 456 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 METTL21CQ5VZV1 264 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CHCHD4Q8N4Q1 142 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MAML1Q92585 1016 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PACSIN1Q9BY11 444 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ABCF3Q9NUQ8 709 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SEPT3Q9UH03 358 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 BLOC1S6Q9UL45 172 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CORO1CQ9ULV4 474 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 CDYLQ9Y232 598 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SFI1A8K8P3 1242 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SNAP23O00161 211 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ONECUT3O60422 494 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 RBP1P09455 135 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CYP3A5P20815 502 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MGAT5Q09328 741 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MED21Q13503 144 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 LBRQ14739 615 aaKnown RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 TTC19Q6DKK2 380 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 SLC4A11Q8NBS3 891 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SPATA33Q96N06 139 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ZFATQ9P243 1243 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 KLHL8Q9P2G9 620 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 SLC4A7Q9Y6M7 1214 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ELF3P78545 371 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 EPS8Q12929 822 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 E2F5Q15329 346 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PRELID2Q8N945 189 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 RNF25Q96BH1 459 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 WRNIP1Q96S55 665 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PAFAH2Q99487 392 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 NACA2Q9H009 215 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 SIX2Q9NPC8 291 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PDGFRAP16234 1089 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CES1P23141 567 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 VPS41P49754 854 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CDC16Q13042 620 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 LONRF1Q17RB8 773 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ELMSAN1Q6PJG2 1045 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 C4orf50Q6ZRC1 276 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 CATSPER4Q7RTX7 472 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 HSPH1Q92598 858 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ERP27Q96DN0 273 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 FGD4Q96M96 766 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PARK7Q99497 189 aaKnown RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 OSBPL1AQ9BXW6 950 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 NAALADL1Q9UQQ1 740 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PHF20L1A8MW92 1017 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 VWA5AO00534 786 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MGRN1O60291 552 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 MYL2P10916 166 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 PTGIRP43119 386 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 TAF6P49848 677 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 ZNF143P52747 638 aaPredicted RBP7.58□□□□□ -1.2
VTA1-202ENST00000367630 SLC34A1Q06495 639 aa7.58□□□□□ -1.2
VTA1-202ENST00000367630 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.58□□□□□ -1.2
VTA1-202ENST00000367630 SNAPC2Q13487 334 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms