RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 PTPRJQ12913 1337 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF318Q5VUA4 2279 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PVALEFA0A1B0GWK0 134 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 C2orf71A6NGG8 1288 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PODXLO00592 558 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 EIF3DO15371 548 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SUSD5O60279 629 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 KINO60870 393 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RHOBTB3O94955 611 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SOD2P04179 222 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ADRB2P07550 413 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 CLTAP09496 248 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RPL17P18621 184 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SCP2P22307 547 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ITPKAP23677 461 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ABCD1P33897 745 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LTBRP36941 435 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PTGIRP43119 386 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 BRCC3P46736 316 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 CYP2J2P51589 502 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 WDR4P57081 412 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 FAM193AP78312 1265 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 UBE3AQ05086 875 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ALCAMQ13740 583 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 MPP2Q14168 576 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PTPN14Q15678 1187 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 UPP1Q16831 310 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 GRAMD1BQ3KR37 738 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 XKR4Q5GH76 650 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RTP2Q5QGT7 225 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 FAM171A1Q5VUB5 890 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SCARA3Q6AZY7 606 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ISM2Q6H9L7 571 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 JADE1Q6IE81 842 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM214Q6NUQ4 689 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LLGL2Q6P1M3 1020 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PRSS55Q6UWB4 352 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 STXBP4Q6ZWJ1 553 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RAB44Q7Z6P3 723 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 DDX53Q86TM3 631 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 NLRP8Q86W28 1048 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 CEP57Q86XR8 500 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RNF168Q8IYW5 571 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 VN1R2Q8NFZ6 395 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF507Q8TCN5 953 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 DHRS4Q9BTZ2 278 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LMAN2LQ9H0V9 348 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 TLE6Q9H808 572 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM206Q9H813 350 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 UBE2ZQ9H832 354 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PDE11AQ9HCR9 933 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 AGPAT3Q9NRZ7 376 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 RBAKQ9NYW8 714 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 HSPBP1Q9NZL4 362 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LMCD1Q9NZU5 365 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 THEGQ9P2T0 379 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SUSD2Q9UGT4 822 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 USP25Q9UHP3 1055 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PUF60Q9UHX1 559 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 PPM1HQ9ULR3 514 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 BARX2Q9UMQ3 279 aaPredicted RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 LZTS1Q9Y250 596 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 TNPO3Q9Y5L0 923 aaKnown RBP3.38□□□□□ -1.87
PTPRC-203ENST00000367367 HCFC2Q9Y5Z7 792 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 STYXL1Q9Y6J8 313 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 SF3B1O75533 1304 aaKnown RBP eCLIP3.38□□□□□ -1.872e-8■■■■■ 71.8
PTPRC-203ENST00000367367 UBE4BO95155 1302 aa3.38□□□□□ -1.87
PTPRC-203ENST00000367367 TICRRQ7Z2Z1 1910 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 BIN1O00499 593 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 FSCN2O14926 492 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TADA2AO75478 443 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 URODP06132 367 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CNPP09543 421 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CTSAP10619 480 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KCNE1P15382 129 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 EPCAMP16422 314 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TKTP29401 623 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CTSOP43234 321 aaPredicted RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 GLUD2P49448 558 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CASP4P49662 377 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 NDUFV1P49821 464 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CDR1P51861 262 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 UBE2HP62256 183 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 INPP5AQ14642 412 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SMC1AQ14683 1233 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM132DQ14C87 1099 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SNRNP35Q16560 246 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CAMK4Q16566 473 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KNOP1Q1ED39 458 aaKnown RBP3.37□□□□□ -1.87
PTPRC-203ENST00000367367 BMT2Q1RMZ1 405 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF423Q2M1K9 1284 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 SLFN12LQ6IEE8 588 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 KIAA1841Q6NSI8 718 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 VHLLQ6RSH7 139 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 CD300LGQ6UXG3 332 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 UNC5AQ6ZN44 842 aa3.37□□□□□ -1.87
PTPRC-203ENST00000367367 BRSK2Q8IWQ3 736 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms