RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ZFATQ9P243 1243 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 AK5Q9Y6K8 562 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SGK1O00141 431 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 PSMD3O43242 534 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 GTF2E2P29084 291 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 HPCAP84074 193 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 GRIN1Q05586 938 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 C2orf54Q08AI8 447 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CNGA2Q16280 664 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 DUOXA2Q1HG44 320 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 FNDC3BQ53EP0 1204 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 BTNL9Q6UXG8 535 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 NOSTRINQ8IVI9 506 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 TAB3Q8N5C8 712 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 TUBA1CQ9BQE3 449 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 KLC2Q9H0B6 622 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 BLZF1Q9H2G9 400 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CUEDC1Q9NWM3 386 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CACNA2D2Q9NY47 1150 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 PSD3Q9NYI0 1048 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 L3MBTL1Q9Y468 752 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 GPR25O00155 361 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 DGAT1O75907 488 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 PFKFB1P16118 471 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RBMS1P29558 406 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 IST1P53990 364 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 HERVK_113P62684 666 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CSTF3Q12996 717 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 DNAJC3Q13217 504 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 ATP1A4Q13733 1029 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 WDR45BQ5MNZ6 344 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 HECTD3Q5T447 861 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RETSATQ6NUM9 610 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CCDC103Q8IW40 242 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 MCEMP1Q8IX19 187 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CENPTQ96BT3 561 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 CAPN10Q9HC96 672 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 FIS1Q9Y3D6 152 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 DNTTP04053 509 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CYP11B2P19099 503 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 C4BPBP20851 252 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CSNK2BP67870 215 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 DEPDC1Q5TB30 811 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CRTC1Q6UUV9 634 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PLD3Q8IV08 490 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 RDM1Q8NG50 284 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NARS2Q96I59 477 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PKD2L2Q9NZM6 624 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PCDHA6Q9UN73 950 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PCDHA8Q9Y5H6 950 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 MED23Q9ULK4 1368 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF839A8K0R7 811 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 RRP8O43159 456 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 MTRF1O75570 445 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TNNI3P19429 210 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ACADSBP45954 432 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ADAM17P78536 824 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TMPRSS15P98073 1019 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 YWHAHQ04917 246 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 RSBN1Q5VWQ0 802 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 KRT78Q8N1N4 520 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NEDD1Q8NHV4 660 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 MTBPQ96DY7 904 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TAF1DQ9H5J8 278 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PLEKHA5Q9HAU0 1116 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 C16orf96A6NNT2 1141 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 B3GAT3O94766 335 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CPA3P15088 417 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 CASP14P31944 242 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 DHPSP49366 369 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 RGS7P49802 495 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TAF6P49848 677 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 MORF4L2Q15014 288 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 IMPG1Q17R60 797 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 BEND6Q5SZJ8 279 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NLRP14Q86W24 1093 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 SIPA1Q96FS4 1042 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 PIGSQ96S52 555 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 GPR88Q9GZN0 384 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 TMEM245Q9H330 911 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NMRK1Q9NWW6 199 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 SPG21Q9NZD8 308 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 NYAP2Q9P242 653 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 POFUT2Q9Y2G5 429 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 SLC27A2O14975 620 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 FOXD2O60548 495 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-206ENST00000367253 MTA2O94776 668 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 HSPA4LO95757 839 aa8.94□□□□□ -0.98
SYNE1-206ENST00000367253 ZBED1O96006 694 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms