RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 DUPD1Q68J44 220 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 PIGZQ86VD9 579 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.71■□□□□ 0.11
NEK2-201ENST00000366998 SEC14L1Q92503 715 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 HSPH1Q92598 858 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 CCDC114Q96M63 670 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 FAM118BQ9BPY3 351 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 VIPAS39Q9H9C1 493 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 NGRNQ9NPE2 291 aaKnown RBP15.71■□□□□ 0.11
NEK2-201ENST00000366998 KRT82Q9NSB4 513 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.11
NEK2-201ENST00000366998 hCG_1818297A0A087WSY0 165 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 DPYSL4O14531 572 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 INPPL1O15357 1258 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 NBNO60934 754 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 TRUB2O95900 331 aaKnown RBP15.7■□□□□ 0.1
NEK2-201ENST00000366998 ECHS1P30084 290 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 PCK1P35558 622 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 CDKN2BP42772 138 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
NEK2-201ENST00000366998 RNASELQ05823 741 aaKnown RBP15.7■□□□□ 0.1
NEK2-201ENST00000366998 ADIGQ0VDE8 80 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 CCDC14Q49A88 953 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 PAQR9Q6ZVX9 377 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 FAM35AQ86V20 835 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 GRK7Q8WTQ7 553 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 NEUROG2Q9H2A3 272 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 DSEQ9UL01 958 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 OGDHLQ9ULD0 1010 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 SNX24Q9Y343 169 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 SCN5AQ14524 2016 aa15.7■□□□□ 0.1
NEK2-201ENST00000366998 MYBPHLA2RUH7 354 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 AP1G2O75843 785 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 BEST1O76090 585 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 PTPN7P35236 360 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 RPL34P49207 117 aaKnown RBP15.69■□□□□ 0.1
NEK2-201ENST00000366998 MAP3K7CLP57077 242 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 FAM189BP81408 668 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 KRT17Q04695 432 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 ADCY2Q08462 1091 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 CCNG2Q16589 344 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 RAB6CQ53S08 254 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 DCLRE1AQ6PJP8 1040 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 CLEC20AQ6ZU45 233 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 SLC26A9Q7LBE3 791 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 DBF4BQ8NFT6 615 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 FAM172AQ8WUF8 416 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 RSPH1Q8WYR4 309 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 KHSRPQ92945 711 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 21.1
NEK2-201ENST00000366998 PCED1BQ96HM7 432 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 RAB6CQ9H0N0 254 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 LRRC4Q9HBW1 653 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 TANC1Q9C0D5 1861 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 F8W810 466 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 ITGB1P05556 798 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 PAX3P23760 479 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 KDELR1P24390 212 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 SCNN1AP37088 669 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 FAM193AP78312 1265 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 SIX6OS1Q8N1H7 587 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 TSEN2Q8NCE0 465 aaKnown RBP15.69■□□□□ 0.1
NEK2-201ENST00000366998 SEPT8Q92599 483 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 HAUS1Q96CS2 278 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 FAM193BQ96PV7 902 aaPredicted RBP15.69■□□□□ 0.1
NEK2-201ENST00000366998 TMEM161AQ9NX61 479 aa15.69■□□□□ 0.1
NEK2-201ENST00000366998 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 ARHGEF37A1IGU5 675 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 C3orf70A6NLC5 250 aaPredicted RBP15.68■□□□□ 0.1
NEK2-201ENST00000366998 M0QZQ0 153 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 B4GALT3O60512 393 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 CAPN15O75808 1086 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 DDHD2O94830 711 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 GAS8O95995 478 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 CYP11A1P05108 521 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 OR1G1P47890 313 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 DYNLT1P63172 113 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 PLEKHG4Q58EX7 1191 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 EFHC1Q5JVL4 640 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 ABI1Q8IZP0 508 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 MYCBPAPQ8TBZ2 947 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 SPATA18Q8TC71 538 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 FAM149B1Q96BN6 582 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 SUSD3Q96L08 255 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 RTP3Q9BQQ7 232 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 TBC1D13Q9NVG8 400 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 ASIC3Q9UHC3 531 aa15.68■□□□□ 0.1
NEK2-201ENST00000366998 FEZ2Q9UHY8 353 aaPredicted RBP15.68■□□□□ 0.1
NEK2-201ENST00000366998 CD48P09326 243 aa15.67■□□□□ 0.1
NEK2-201ENST00000366998 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
NEK2-201ENST00000366998 RPL21P46778 160 aaKnown RBP15.67■□□□□ 0.1
NEK2-201ENST00000366998 RABGGTBP53611 331 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms