RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 TUBGCP3Q96CW5 907 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 BTBD6Q96KE9 485 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 NAT9Q9BTE0 207 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 DCTN4Q9UJW0 460 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 FIS1Q9Y3D6 152 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ANKRD63C9JTQ0 380 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 HUS1O60921 280 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 KLHL2O95198 593 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 YY1P25490 414 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MARK3P27448 753 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 BTKQ06187 659 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLC35G1Q2M3R5 365 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ITPRIPL1Q6GPH6 555 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 LVRNQ6Q4G3 990 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZNF606Q8WXB4 792 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 FAM149B1Q96BN6 582 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 NTPCRQ9BSD7 190 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 AP5M1Q9H0R1 490 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 NSMCE4AQ9NXX6 385 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ERAP1Q9NZ08 941 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PCSK1NQ9UHG2 260 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 UBR2Q8IWV8 1755 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 STRNO43815 780 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 LAMC2Q13753 1193 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CNGA2Q16280 664 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 EFHC1Q5JVL4 640 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 METTL7BQ6UX53 244 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MICALL2Q8IY33 904 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SIX6OS1Q8N1H7 587 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MAGEC3Q8TD91 643 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MPP4Q96JB8 637 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PI4K2AQ9BTU6 479 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MANSC1Q9H8J5 431 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MLXIPLQ9NP71 852 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SIX2Q9NPC8 291 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SAR1AQ9NR31 198 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 HACL1Q9UJ83 578 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RRN3P2A6NIE6 340 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 VWA5AO00534 786 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 GH1P01241 217 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 VCPP55072 806 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SPIRE1Q08AE8 756 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 KCNA1Q09470 495 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 BBS5Q8N3I7 341 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RAD21L1Q9H4I0 556 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MTSS1O43312 755 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 ATMINO43313 823 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 PNPLA4P41247 253 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 DLG4P78352 724 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 AUHQ13825 339 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCDC85BQ15834 202 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 DCAF4L1Q3SXM0 396 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 WASHC2DQ5SRD0 308 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 KIF2BQ8N4N8 673 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 DNAAF3Q8N9W5 541 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZFYVE19Q96K21 471 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 CNPY3Q9BT09 278 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TMEM165Q9HC07 324 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 DKK3Q9UBP4 350 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 GINS2Q9Y248 185 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 HSPA4LO95757 839 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TGM2P21980 687 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 PTGER2P43116 358 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 CDO1Q16878 200 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 LMBRD2Q68DH5 695 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 PORCNQ9H237 461 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 ASB7Q9H672 318 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCDC134Q9H6E4 229 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 AGAP1Q9UPQ3 857 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TRDMT1O14717 391 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 LSM1O15116 133 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 HOXC6P09630 235 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 DRD4P21917 467 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 THOC5Q13769 683 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 LRRC36Q1X8D7 754 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 CATSPER4Q7RTX7 472 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 POLNQ7Z5Q5 900 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 INPP5DQ92835 1189 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLCO2A1Q92959 643 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 FGFBP2Q9BYJ0 223 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 RAB6BQ9NRW1 208 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZMYND8Q9ULU4 1186 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 GOLGA8CPA6NN73 597 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 PI4K2BG5E9Z4 385 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 XPO1O14980 1071 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TCF7P36402 384 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 PTK7Q13308 1070 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 KLC3Q6P597 504 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 ANKMY2Q8IV38 441 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TLCD1Q96CP7 247 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 LRRC39Q96DD0 335 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 KIF12Q96FN5 646 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 NSL1Q96IY1 281 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TUBA8Q9NY65 449 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 SLC12A6Q9UHW9 1150 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 COL2A1P02458 1487 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 C5orf60A6NFR6 353 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 TBKBP1A7MCY6 615 aa5.57□□□□□ -1.52
CDC42BPA-204ENST00000366767 A8MXQ7 604 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms