RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 E5RI56 91 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 PSMC3P17980 439 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 DNAJB2P25686 324 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 DLG3Q92796 817 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMA16Q96EY4 203 aaKnown RBP12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 TRIM54Q9BYV2 358 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 APOC4-APOC2K7ER74 178 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 APOC2P02655 101 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 XPAP23025 273 aaPredicted RBP12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 BRD2P25440 801 aaKnown RBP12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 NEK2P51955 445 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 C1orf186Q6ZWK4 172 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 TXNRD3Q86VQ6 643 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 MMP19Q99542 508 aa12.23□□□□□ -0.45
CDC42BPA-202ENST00000366764 AFF2P51816 1311 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 TNFAIP8O95379 198 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 IFNA8P32881 189 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 SULT1E1P49888 294 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 PRMT9Q6P2P2 845 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 AKAP10O43572 662 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 F9P00740 461 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 OAZ1P54368 228 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 FKBP1CQ5VVH2 108 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ARCQ7LC44 396 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 HAS1Q92839 578 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 EXT2Q93063 718 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 MYLK2Q9H1R3 596 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 LRRC40Q9H9A6 602 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 PYGLP06737 847 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 TGFB3P10600 412 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 SV2CQ496J9 727 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 AGAP9Q5VTM2 703 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 C4orf32Q8N8J7 132 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ANKRD6Q9Y2G4 727 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 GAKO14976 1311 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 RCCD1A6NED2 376 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 C21orf2O43822 256 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 PSMC6P62333 389 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF268Q14587 947 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 IL17AQ16552 155 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NR1H4Q96RI1 486 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 RIC8BQ9NVN3 520 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NCKIPSDQ9NZQ3 722 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLC25A27O95847 323 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLC2A3P11169 496 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 RTP1P59025 263 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 KRR1Q13601 381 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZPBP2Q6X784 338 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 IRF2BP2Q7Z5L9 587 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 LRMDAQ9H2I8 198 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 MAGED2Q9UNF1 606 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NUDT2P50583 147 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 MGAT5Q09328 741 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 LACTB2Q53H82 288 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 PRELID2Q8N945 189 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF669Q96BR6 464 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 MIEF2Q96C03 454 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 CISHQ9NSE2 258 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 EIF4BP23588 611 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NME3Q13232 169 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 IMPG1Q17R60 797 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 NINJ2Q9NZG7 142 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 FCHO1O14526 889 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 CHADO15335 359 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 RARRES1P49788 294 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 LRRC43Q8N309 656 aa12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
CDC42BPA-202ENST00000366764 FBXO21O94952 628 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 MYBL2P10244 700 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 HMGCS2P54868 508 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 ENPEPQ07075 957 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMEM259Q4ZIN3 620 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMTC4Q5T4D3 741 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 UNC45BQ8IWX7 931 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 CNDP1Q96KN2 507 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMEM121Q9BTD3 319 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 SLITRK3O94933 977 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 UBTFL6P0CB48 400 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 BCAT1P54687 386 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 ZNF235Q14590 738 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 PARD3BQ8TEW8 1205 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 SHC3Q92529 594 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 HK2P52789 917 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 ACMSDQ8TDX5 336 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 EPS8L2Q9H6S3 715 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM86B1E9PN63 330 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 FAM86B2P0C5J1 330 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms