RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 TDGF1P13385 188 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 TAF10Q12962 218 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 GAS6Q14393 721 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 FUKQ8N0W3 1084 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 KIAA1958Q8N8K9 716 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 SH3RF2Q8TEC5 729 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 ATRIPQ8WXE1 791 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 SMARCE1Q969G3 411 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 KCNK16Q96T55 309 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 APOBEC3GQ9HC16 384 aaKnown RBP25.08■■□□□ 1.61
SHC1-201ENST00000366442 PCDHA5Q9Y5H7 936 aa25.08■■□□□ 1.61
SHC1-201ENST00000366442 EP300Q09472 2414 aaPredicted RBP25.08■■□□□ 1.61
SHC1-201ENST00000366442 FRYLO94915 3013 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 OLFM2O95897 454 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 EPB41P11171 864 aaKnown RBP25.07■■□□□ 1.6
SHC1-201ENST00000366442 ARSAP15289 507 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 TRIM21P19474 475 aaKnown RBP25.07■■□□□ 1.6
SHC1-201ENST00000366442 YWHAQP27348 245 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 NRLP54845 237 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 SLC7A9P82251 487 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 KRT39Q6A163 491 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 TSSK4Q6SA08 328 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 CPA6Q8N4T0 437 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 CCDC150Q8NCX0 1101 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 PDZD8Q8NEN9 1154 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 CHFRQ96EP1 664 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 FAXDC2Q96IV6 333 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 TSG101Q99816 390 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 RBM12Q9NTZ6 932 aaKnown RBP25.07■■□□□ 1.6
SHC1-201ENST00000366442 COMMD8Q9NX08 183 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 DUS2Q9NX74 493 aaKnown RBP25.07■■□□□ 1.6
SHC1-201ENST00000366442 IL37Q9NZH6 218 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 HMGXB4Q9UGU5 601 aa25.07■■□□□ 1.6
SHC1-201ENST00000366442 TRDMT1O14717 391 aaKnown RBP25.06■■□□□ 1.6
SHC1-201ENST00000366442 TNFRSF10BO14763 440 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 STX10O60499 249 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 LILRB5O75023 590 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 PAPSS2O95340 614 aaPredicted RBP25.06■■□□□ 1.6
SHC1-201ENST00000366442 OAS1P00973 400 aaKnown RBP25.06■■□□□ 1.6
SHC1-201ENST00000366442 CXCL12P48061 93 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 IFNAR2P48551 515 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 ZC3H3Q8IXZ2 948 aaKnown RBP25.06■■□□□ 1.6
SHC1-201ENST00000366442 ATP2A3Q93084 1043 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 NIF3L1Q9GZT8 377 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 ECT2Q9H8V3 914 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 KRT82Q9NSB4 513 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 OTOGLQ3ZCN5 2332 aa25.06■■□□□ 1.6
SHC1-201ENST00000366442 SLC16A3O15427 465 aaKnown RBP25.05■■□□□ 1.6
SHC1-201ENST00000366442 AP1G2O75843 785 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 SLC5A3P53794 718 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 FKBP3Q00688 224 aaKnown RBP25.05■■□□□ 1.6
SHC1-201ENST00000366442 GRSF1Q12849 480 aaKnown RBP eCLIP25.05■■□□□ 1.6
SHC1-201ENST00000366442 EML3Q32P44 896 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 TMEM196Q5HYL7 178 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 SLC2A14Q8TDB8 520 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 FBXO32Q969P5 355 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 EXOC4Q96A65 974 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 RNF38Q9H0F5 515 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 MMRN2Q9H8L6 949 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 CSNK1G1Q9HCP0 422 aa25.05■■□□□ 1.6
SHC1-201ENST00000366442 FAM92AA1XBS5 289 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 CCDC130P13994 396 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 MXI1P50539 228 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 ZXDBP98169 803 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 SATB1Q01826 763 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 LRRC63Q05C16 580 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 ORC1Q13415 861 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 SNX30Q5VWJ9 437 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 Q6ZS52 159 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 SUMF1Q8NBK3 374 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 ERCC4Q92889 916 aaPredicted RBP25.04■■□□□ 1.6
SHC1-201ENST00000366442 EEF2KMTQ96G04 330 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 HNRNPABQ99729 332 aaKnown RBP25.04■■□□□ 1.6
SHC1-201ENST00000366442 NT5C1AQ9BXI3 368 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.04■■□□□ 1.6
SHC1-201ENST00000366442 CIZ1Q9ULV3 898 aaPredicted RBP25.04■■□□□ 1.6
SHC1-201ENST00000366442 WNT6Q9Y6F9 365 aa25.04■■□□□ 1.6
SHC1-201ENST00000366442 LEFTY2O00292 366 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 ABL1P00519 1130 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 GJA4P35212 333 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 IFRD2Q12894 506 aaPredicted RBP25.03■■□□□ 1.6
SHC1-201ENST00000366442 ANKRD40Q6AI12 368 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 C12orf29Q8N999 325 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 FBXL13Q8NEE6 735 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 TTC16Q8NEE8 873 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 ZMIZ2Q8NF64 920 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 SCAMP5Q8TAC9 235 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 TWNKQ96RR1 684 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 SMOQ99835 787 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 DNAI2Q9GZS0 605 aa25.03■■□□□ 1.6
SHC1-201ENST00000366442 CILPO75339 1184 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 ZDHHC11BP0C7U3 371 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 TUBP50607 506 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 NR1H3Q13133 447 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 FSTL4Q6MZW2 842 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 TTC39CQ8N584 583 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 SEMA4DQ92854 862 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 EPC1Q9H2F5 836 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 FAM124BQ9H5Z6 455 aaPredicted RBP25.02■■□□□ 1.6
SHC1-201ENST00000366442 FAM49BQ9NUQ9 324 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms