RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ADGRG2Q8IZP9 1017 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 PGBD3Q8N328 593 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 TMEM161BQ8NDZ6 487 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 MYRFLQ96LU7 910 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 PKMYT1Q99640 499 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC6A16Q9GZN6 736 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 TMEM206Q9H813 350 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 FNDC3AQ9Y2H6 1198 aaKnown RBP9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLCO1B1Q9Y6L6 691 aa9.15□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRAV19A0A0A6YYK7 116 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 A0A1W2PQD8 194 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 LEFTY2O00292 366 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 CYB561D2O14569 222 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 PRPF40AO75400 957 aaKnown RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 SYPP08247 313 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 TCF3P15923 654 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 NDUFV2P19404 249 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 EIF2S3P41091 472 aaKnown RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 DPP6P42658 865 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ABCG1P45844 678 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 IRX6P78412 446 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 DHCR24Q15392 516 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 C1orf186Q6ZWK4 172 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 SPPL2BQ8TCT7 592 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 THAP11Q96EK4 314 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 TRMT2BQ96GJ1 504 aaKnown RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ZNF419Q96HQ0 510 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 PNMA5Q96PV4 448 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 PNKPQ96T60 521 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ACOX2Q99424 681 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 PRDM16Q9HAZ2 1276 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 SLC24A3Q9HC58 644 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ARHGAP26Q9UNA1 814 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 CYP8B1Q9UNU6 501 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 ANK1P16157 1881 aa9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 MUC22E2RYF6 1773 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P39-201ENST00000366304 SHROOM3Q8TF72 1996 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 UBR5O95071 2799 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 PP2D1A8MPX8 630 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CLDN3O15551 220 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CDC45O75419 566 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 NFATC1O95644 943 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CSH1P0DML2 217 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CSH2P0DML3 217 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 ACAT1P24752 427 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CCT6AP40227 531 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 USP46P62068 366 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 ATP2C1P98194 919 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 PPP2R3AQ06190 1150 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 RAD51AP2Q09MP3 1159 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 NR1H3Q13133 447 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 ZNF174Q15697 407 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 SMAD1Q15797 465 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 EOGTQ5NDL2 527 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 LMBRD2Q68DH5 695 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 RINT1Q6NUQ1 792 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 SLC39A4Q6P5W5 647 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 ZPBP2Q6X784 338 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 DBX2Q6ZNG2 339 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 DIS3L2Q8IYB7 885 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 C4orf32Q8N8J7 132 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 CCDC26Q8TAB7 109 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 SETD7Q8WTS6 366 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 C2orf15Q8WU43 125 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 FAM84AQ96KN4 292 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 HNRNPABQ99729 332 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 NTPCRQ9BSD7 190 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 SEMA4CQ9C0C4 833 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 RNF38Q9H0F5 515 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 DDX19AQ9NUU7 478 aaKnown RBP9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 PCDHB5Q9Y5E4 795 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 COL12A1Q99715 3063 aa9.13□□□□□ -0.95
HMGB1P39-201ENST00000366304 NPHP3-ACAD11A0A0J9YXS1 232 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 PLK4O00444 970 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 ARHGAP6O43182 974 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 PFKFB2O60825 505 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 CILPO75339 1184 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 HDCP19113 662 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 PSMA5P28066 241 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 GRIA2P42262 883 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 WNT7BP56706 349 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 SRSF1Q07955 248 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 PTPRNQ16849 979 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 HSF5Q4G112 596 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 SLC36A4Q6YBV0 504 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 ETFBKMTQ8IXQ9 262 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 WBP2Q969T9 261 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 TRIM9Q9C026 710 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
HMGB1P39-201ENST00000366304 SCN1AP35498 2009 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms