RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 BCDIN3DQ7Z5W3 292 aaKnown RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LIX1LQ8IVB5 337 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ABRAQ8N0Z2 381 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCSK9Q8NBP7 692 aaKnown RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SMCR8Q8TEV9 937 aaPredicted RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SLC35A4Q96G79 324 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LENG8Q96PV6 779 aaPredicted RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MACROD1Q9BQ69 325 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 HIPK2Q9H2X6 1198 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TRIM36Q9NQ86 728 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SELENONQ9NZV5 590 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 USP35Q9P2H5 1018 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 XPR1Q9UBH6 696 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LRP12Q9Y561 859 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA9Q9Y5G4 932 aaKnown RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA8Q9Y5G5 932 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA7Q9Y5G6 932 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA6Q9Y5G7 932 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA3Q9Y5H0 932 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHA1Q9Y5I3 950 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LRRC14BA6NHZ5 514 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 B4DGG1 531 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PRSS44E7EML9 344 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 AP4M1O00189 453 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FOXN3O00409 490 aaPredicted RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CES2O00748 559 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 DCLK1O15075 740 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TLR2O60603 784 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PDE8BO95263 885 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 IL33O95760 270 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 AHSGP02765 367 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ALPLP05186 524 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CD19P15391 556 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 EPHA3P29320 983 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TACR3P29371 465 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 GKP32189 559 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ALDH5A1P51649 535 aaPredicted RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 DGKEP52429 567 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 E2F1Q01094 437 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 EXOSC9Q06265 439 aaKnown RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MYO1EQ12965 1108 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CCNIQ14094 377 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MLC1Q15049 377 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCBP2Q15366 365 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 INSCQ1MX18 579 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 KRTAP27-1Q3LI81 207 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SLC9C1Q4G0N8 1177 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CC2D1BQ5T0F9 858 aaKnown RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZNF783Q6ZMS7 281 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 COLCA1Q6ZS62 124 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PTCHD4Q6ZW05 846 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PPP1R3BQ86XI6 285 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 GAS2L3Q86XJ1 694 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PRR18Q8N4B5 295 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MMS19Q96T76 1030 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MAP3K14Q99558 947 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 NUP88Q99567 741 aaPredicted RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TMEM204Q9BSN7 226 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FAM234AQ9H0X4 552 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 GAR1Q9NY12 217 aaKnown RBP2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PROCRQ9UNN8 238 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MED16Q9Y2X0 877 aa2.26□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TCRBV5S1A1TA0A578 114 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LACTBL1A8MY62 500 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CNOT3O75175 753 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PMPCBO75439 489 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SYF2O95926 243 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 POU2F2P09086 479 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PSG1P11464 419 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CDK11BP21127 795 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 IL6STP40189 918 aaPredicted RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CDKN2AP42771 156 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MAP2K6P52564 334 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 COPB1P53618 953 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 BCAT1P54687 386 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LINC00205P59089 165 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 NKX6-1P78426 367 aaPredicted RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MTMR1Q13613 665 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 RAB32Q13637 225 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 BOP1Q14137 746 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FGL2Q14314 439 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PLS1Q14651 629 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 KCNB1Q14721 858 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LARS2Q15031 903 aaKnown RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PFKFB3Q16875 520 aaPredicted RBP2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FAM110CQ1W6H9 321 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TMEM240Q5SV17 173 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 GIMAP6Q6P9H5 292 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 RANBP10Q6VN20 620 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 DCDC5Q6ZRR9 648 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 OR6B3Q8NGW1 331 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 BCAS4Q8TDM0 211 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MAP4K1Q92918 833 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 HIC2Q96JB3 615 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 NLRP4Q96MN2 994 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MEIS3Q99687 375 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MESP1Q9BRJ9 268 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 C17orf80Q9BSJ5 609 aa2.25□□□□□ -2.05
RNU6-1048P-201ENST00000364054 CXorf36Q9H7Y0 433 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms