RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-201ENST00000361716 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 CD101Q93033 1021 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 SKA1Q96BD8 255 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 WWP1Q9H0M0 922 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 SELENONQ9NZV5 590 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 VAV3Q9UKW4 847 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
VAMP1-201ENST00000361716 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 DGKIO75912 1065 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 GLRA2P23416 452 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 MAPK10P53779 464 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 HYIQ5T013 277 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 CCT7Q99832 543 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TRIM49D1C9J1S8 452 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 DNALI1O14645 258 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TRMUO75648 421 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 DLDP09622 509 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 SYDE1Q6ZW31 735 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 FBXL13Q8NEE6 735 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 OLIG1Q8TAK6 271 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 FAM172AQ8WUF8 416 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 Q9H521 79 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 KCNK13Q9HB14 408 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 VILLO15195 856 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TCEA3O75764 348 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 SNHG28P0DPA3 235 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TMED10P49755 219 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 MTTPP55157 894 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 GABPAQ06546 454 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 PATL1Q86TB9 770 aaKnown RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 NLRX1Q86UT6 975 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 E2F7Q96AV8 911 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 SERAC1Q96JX3 654 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 HSD17B14Q9BPX1 270 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 MAF1Q9H063 256 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 STK32BQ9NY57 414 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 SOX13Q9UN79 622 aa13.22□□□□□ -0.29
VAMP1-201ENST00000361716 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-201ENST00000361716 TIAM2Q8IVF5 1701 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 ADCY6O43306 1168 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 FKBP6O75344 327 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 BBOX1O75936 387 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 MRPS22P82650 360 aaKnown RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 DMP1Q13316 513 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 ORC1Q13415 861 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 MSLNQ13421 630 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 DGKZQ13574 1117 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 LPIN1Q14693 890 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 TLR1Q15399 786 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 NRF1Q16656 503 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 APOBEC3HQ6NTF7 200 aaKnown RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 UTS2BQ765I0 119 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 C12orf50Q8NA57 414 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 DCAF4Q8WV16 495 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-201ENST00000361716 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 NHSQ6T4R5 1651 aa13.21□□□□□ -0.29
VAMP1-201ENST00000361716 AIM2O14862 343 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 CFHP08603 1231 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 LIG4P49917 911 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 PRAMEP78395 509 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 CCNG2Q16589 344 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 ANKRD22Q5VYY1 191 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 SV2AQ7L0J3 742 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 RHOT1Q8IXI2 618 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.3
VAMP1-201ENST00000361716 COPS7BQ9H9Q2 264 aaPredicted RBP13.21□□□□□ -0.3
VAMP1-201ENST00000361716 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.3
VAMP1-201ENST00000361716 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 LY75O60449 1722 aa13.21□□□□□ -0.3
VAMP1-201ENST00000361716 LYPLA1O75608 230 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
VAMP1-201ENST00000361716 FDX1P10109 184 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
VAMP1-201ENST00000361716 GJA8P48165 433 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms