RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 TRIM72Q6ZMU5 477 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 ANKMY2Q8IV38 441 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 CPXM1Q96SM3 734 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 IP6K2Q9UHH9 426 aa16.93■□□□□ 0.3
IFT140-201ENST00000361339 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 GCAP28676 217 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 GSTT1P30711 240 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 RPA3P35244 121 aaPredicted RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 VHLP40337 213 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 LRRC36Q1X8D7 754 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 PARP6Q2NL67 630 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 ZPBP2Q6X784 338 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 VPS52Q8N1B4 723 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 GRK7Q8WTQ7 553 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 PRR11Q96HE9 360 aaPredicted RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 SIP14410 1827 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 SKIP12755 728 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 MAGEA4P43358 317 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 NEK3P51956 506 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 EFTUD2Q15029 972 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■□□□ 14.3
IFT140-201ENST00000361339 ZC3H12AQ5D1E8 599 aaKnown RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 ACSBG2Q5FVE4 666 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 MDH1BQ5I0G3 518 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 ATF7IP2Q5U623 682 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 EFCAB12Q6NXP0 572 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 CCDC125Q86Z20 511 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 MAIP1Q8WWC4 291 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 MCUR1Q96AQ8 359 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 DCLRE1BQ9H816 532 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 RBPJLQ9UBG7 517 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 hCG_1818297A0A087WSY0 165 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 TBX10O75333 385 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 BAG2O95816 211 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 MCL1Q07820 350 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
IFT140-201ENST00000361339 ANKRD22Q5VYY1 191 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 NLRP9Q7RTR0 991 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 WDR60Q8WVS4 1066 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 CDT1Q9H211 546 aa16.92■□□□□ 0.3
IFT140-201ENST00000361339 PTPRFP10586 1907 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 EXOC1LA0A1B0GW35 172 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 ZBTB16Q05516 673 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
IFT140-201ENST00000361339 HHATQ5VTY9 493 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 CCDC89Q8N998 374 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 C1orf127Q8N9H9 656 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 TMEM35BQ8NCS4 154 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 VCPIP1Q96JH7 1222 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 CADM1Q9BY67 442 aaKnown RBP16.91■□□□□ 0.3
IFT140-201ENST00000361339 CSADQ9Y600 493 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 ERBB2P04626 1255 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 SKIV2L2P42285 1042 aaKnown RBP16.91■□□□□ 0.3
IFT140-201ENST00000361339 CDKN2BP42772 138 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 ENPEPQ07075 957 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 SLC1A5Q15758 541 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 PPP1R21Q6ZMI0 780 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.3
IFT140-201ENST00000361339 UBA3Q8TBC4 463 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 STMN2Q93045 179 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 ITFG2Q969R8 447 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
IFT140-201ENST00000361339 A0A1W2PPM1 405 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 SGK1O00141 431 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 GYG2O15488 501 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 LRCH4O75427 683 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 GRAP2O75791 330 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 VTNP04004 478 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 ITGB3P05106 788 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 PSMA2P25787 234 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 IER5Q5VY09 327 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 LRRC74BQ6ZQY2 392 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 FBXO6Q9NRD1 293 aaPredicted RBP16.9■□□□□ 0.3
IFT140-201ENST00000361339 LTBP3Q9NS15 1303 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 C3orf70A6NLC5 250 aaPredicted RBP16.9■□□□□ 0.3
IFT140-201ENST00000361339 FGFR1P11362 822 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
IFT140-201ENST00000361339 THOC5Q13769 683 aaKnown RBP16.9■□□□□ 0.3
IFT140-201ENST00000361339 MSS51Q4VC12 460 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 IRGCQ6NXR0 463 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 MPZL3Q6UWV2 235 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 ZBTB8OSQ8IWT0 167 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 RFWD2Q8NHY2 731 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 ARL8BQ9NVJ2 186 aa16.9■□□□□ 0.3
IFT140-201ENST00000361339 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.9■□□□□ 0.3
IFT140-201ENST00000361339 LACTBL1A8MY62 500 aa16.89■□□□□ 0.3
IFT140-201ENST00000361339 CDH16O75309 829 aa16.89■□□□□ 0.3
IFT140-201ENST00000361339 DCTN3O75935 186 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms