RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GNL1P36915 607 aaPredicted RBP22.51■■□□□ 1.19
CD47-202ENST00000361309 PPP3CCP48454 512 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 ZNF252P-AS1Q0IIN9 211 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 MESP2Q0VG99 397 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 CUL4AQ13619 759 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 HS2ST1Q7LGA3 356 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 TRAPPC11Q7Z392 1133 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 WDR49Q8IV35 697 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 PDILTQ8N807 584 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 C8orf48Q96LL4 319 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 MRPL45Q9BRJ2 306 aaKnown RBP22.51■■□□□ 1.19
CD47-202ENST00000361309 SNX25Q9H3E2 840 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 ZZEF1O43149 2961 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 AKAP13Q12802 2813 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 CDX4O14627 284 aaPredicted RBP22.5■■□□□ 1.19
CD47-202ENST00000361309 OLFM2O95897 454 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 CST3P01034 146 aaPredicted RBP22.5■■□□□ 1.19
CD47-202ENST00000361309 HOXD13P35453 343 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 TIE1P35590 1138 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 IRX4P78413 519 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 FOXC1Q12948 553 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 TAF10Q12962 218 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 STXBP4Q6ZWJ1 553 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 ALLCQ8N6M5 410 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 KIAA1958Q8N8K9 716 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 TXNDC5Q8NBS9 432 aaKnown RBP22.5■■□□□ 1.19
CD47-202ENST00000361309 OR6B3Q8NGW1 331 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 OLIG1Q8TAK6 271 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 RLN3Q8WXF3 142 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 PIGKQ92643 395 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 PNKPQ96T60 521 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 CFAP97Q9P2B7 532 aa22.5■■□□□ 1.19
CD47-202ENST00000361309 C1QTNF9BB2RNN3 333 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 SLC9A3R1O14745 358 aaPredicted RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 ALDH1A2O94788 518 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 KLF8O95600 359 aaPredicted RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 OAS1P00973 400 aaKnown RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 C1QTNF9P0C862 333 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 CACNA2D1P54289 1103 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 SLC39A14Q15043 492 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 TDRD10Q5VZ19 366 aaKnown RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 RHBDF2Q6PJF5 856 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 C12orf40Q86WS4 652 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 IL17RCQ8NAC3 791 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 RDH13Q8NBN7 331 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 USP28Q96RU2 1077 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 KIAA1586Q9HCI6 787 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 TMEM30AQ9NV96 361 aa22.49■■□□□ 1.19
CD47-202ENST00000361309 RALYQ9UKM9 306 aaKnown RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 CIZ1Q9ULV3 898 aaPredicted RBP22.49■■□□□ 1.19
CD47-202ENST00000361309 ASPMQ8IZT6 3477 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 SGK1O00141 431 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 TACC1O75410 805 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 KAT7O95251 611 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 APODP05090 189 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 DLATP10515 647 aaKnown RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 MBL2P11226 248 aaPredicted RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 CHRM1P11229 460 aaPredicted RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 PTPN1P18031 435 aaKnown RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 SYT1P21579 422 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 IFRD2Q12894 506 aaPredicted RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 EMC10Q5UCC4 262 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 SLITRK1Q96PX8 696 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 DPEP3Q9H4B8 488 aa22.48■■□□□ 1.19
CD47-202ENST00000361309 MORC2Q9Y6X9 1032 aaPredicted RBP22.48■■□□□ 1.19
CD47-202ENST00000361309 CEACAM1P13688 526 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 TNNI1P19237 187 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 SPINK2P20155 84 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 CSRP1P21291 193 aaKnown RBP22.47■■□□□ 1.19
CD47-202ENST00000361309 EIF2DP41214 584 aaKnown RBP22.47■■□□□ 1.19
CD47-202ENST00000361309 P2RY2P41231 377 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 KDSRQ06136 332 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 SNRNP35Q16560 246 aaKnown RBP22.47■■□□□ 1.19
CD47-202ENST00000361309 UAP1L1Q3KQV9 507 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 UNQ6494/PRO21346Q6UXR6 183 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 LPCAT2Q7L5N7 544 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 FRMD1Q8N878 549 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 FNBP1Q96RU3 617 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 ZNF518BQ9C0D4 1074 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 ELOVL4Q9GZR5 314 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 TNMDQ9H2S6 317 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 POLMQ9NP87 494 aaPredicted RBP22.47■■□□□ 1.19
CD47-202ENST00000361309 ZDHHC4Q9NPG8 344 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 ARHGEF4Q9NR80 690 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 WASF3Q9UPY6 502 aa22.47■■□□□ 1.19
CD47-202ENST00000361309 A0A0A0MRY4 1105 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 CLDN5O00501 218 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 EIF3DO15371 548 aaKnown RBP eCLIP22.46■■□□□ 1.19
CD47-202ENST00000361309 MAP3K13O43283 966 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 ADH1CP00326 375 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 ADH5P11766 374 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 KIR2DL1P43626 348 aaPredicted RBP22.46■■□□□ 1.19
CD47-202ENST00000361309 TNNC1P63316 161 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 WDR72Q3MJ13 1102 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 HSF5Q4G112 596 aaPredicted RBP22.46■■□□□ 1.19
CD47-202ENST00000361309 ARMCX6Q7L4S7 300 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 DDX42Q86XP3 938 aaKnown RBP eCLIP22.46■■□□□ 1.19
CD47-202ENST00000361309 TMEFF1Q8IYR6 380 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 WHAMMQ8TF30 809 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms