RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CENPCQ03188 943 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 RAD9BQ6WBX8 426 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 ISCUQ9H1K1 167 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 TAS2R14Q9NYV8 317 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 EPN1Q9Y6I3 576 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 NCOR1O75376 2440 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 RTN2O75298 545 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 MMP8P22894 467 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 HOXA9P31269 272 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 ACADSBP45954 432 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 GABRB2P47870 512 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 RGS7P49802 495 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 CCZ1BP86790 482 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 CCZ1P86791 482 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 TWF1Q12792 350 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 PDCLQ13371 301 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 PLD1Q13393 1074 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 NUP93Q8N1F7 819 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 CASP10Q92851 521 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 NOX5Q96PH1 765 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 ASB3Q9Y575 518 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
NIF3L1-201ENST00000359683 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 EIF3CLB5ME19 914 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 ZNF263O14978 683 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 NCK2O43639 380 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 HNRNPA1P09651 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 EPHB3P54753 998 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 TFF2Q03403 129 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 PTP4A2Q12974 167 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 ADAM15Q13444 863 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 MTF1Q14872 753 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 COL19A1Q14993 1142 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 PTPN20Q4JDL3 420 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 PPM1LQ5SGD2 360 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 ELMSAN1Q6PJG2 1045 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 DENND5BQ6ZUT9 1274 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 GPRIN1Q7Z2K8 1008 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 VCPIP1Q96JH7 1222 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 EIF3CQ99613 913 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 SPTLC3Q9NUV7 552 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 ZDHHC7Q9NXF8 308 aa13.07□□□□□ -0.32
NIF3L1-201ENST00000359683 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 NDUFA10O95299 355 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 GLP2RO95838 553 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 LRG1P02750 347 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 POU2F2P09086 479 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 CSH1P0DML2 217 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 CSH2P0DML3 217 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 HMGA1P17096 107 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 SLC5A3P53794 718 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 SNX16P57768 344 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 CTC1Q2NKJ3 1217 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 PM20D1Q6GTS8 502 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MON1BQ7L1V2 547 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 DNAJB7Q7Z6W7 309 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MCOLN2Q8IZK6 566 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 SCML4Q8N228 414 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 C18orf8Q96DM3 657 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 ST7Q9NRC1 585 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 DZANK1Q9NVP4 752 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 REV3LO60673 3130 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 E5RJQ4 531 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms