RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CHD7Q9P2D1 2997 aa5.35□□□□□ -1.55
ATXN3-202ENST00000359366 LRRD1A4D1F6 860 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PIRO00625 290 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CES2O00748 559 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TPD52L2O43399 206 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MED7O43513 233 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 B4GALT3O60512 393 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 BEST1O76090 585 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SNUPNO95149 360 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MAP3K6O95382 1288 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 LSM8O95777 96 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 KRT1P04264 644 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PAEPP09466 180 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 VDRP11473 427 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 GGCXP38435 758 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 NRLP54845 237 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CDC42EP1Q00587 391 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 POU5F1Q01860 360 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 INCA1Q0VD86 236 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PAK2Q13177 524 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TCEAL1Q15170 157 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MTFR1Q15390 333 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 KYAT1Q16773 422 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PPP1R15BQ5SWA1 713 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC137Q6PK04 289 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MFSD7Q6UXD7 560 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 RSPH3Q86UC2 560 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 JAMLQ86YT9 394 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 IFT20Q8IY31 132 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC105Q8IYK2 499 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ADGRF2Q8IZF7 708 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 C3orf20Q8ND61 904 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 STKLD1Q8NE28 680 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 UHMK1Q8TAS1 419 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SLC2A14Q8TDB8 520 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 HSPH1Q92598 858 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM11Q96F44 468 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ARPC5LQ9BPX5 153 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ADAM33Q9BZ11 813 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 VRTNQ9H8Y1 702 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PLEKHA5Q9HAU0 1116 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CYP3A43Q9HB55 503 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MRPL47Q9HD33 250 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM17Q9Y577 477 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SCINQ9Y6U3 715 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 UNC80Q8N2C7 3258 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CASP8AP2Q9UKL3 1982 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF638Q14966 1978 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SYNJ2BP-COX16A0A087WUM0 186 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 GOLGA6L10A0A0M3HER8 536 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 A0A1W2PQ45 241 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 A0A1W2PQY0 241 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CYB561D2O14569 222 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PHF2O75151 1096 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 FAM200BP0CF97 657 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ETS1P14921 441 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 KCNE1P15382 129 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PECAM1P16284 738 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PAX3P23760 479 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CTNNA2P26232 953 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 AXLP30530 894 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ELF1P32519 619 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CDH5P33151 784 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PTGIRP43119 386 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 BRCC3P46736 316 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 RPL21P46778 160 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 NDUFV1P49821 464 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TAF6P49848 677 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PLTPP55058 493 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 BCAR1P56945 870 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CORO7P57737 925 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SFSWAPQ12872 951 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MTM1Q13496 603 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 IRF5Q13568 498 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CNGA2Q16280 664 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MAP3K21Q5TCX8 1036 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 NAIF1Q69YI7 327 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 APBB1IPQ7Z5R6 666 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 RNF180Q86T96 592 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CD302Q8IX05 232 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 GLIS1Q8NBF1 620 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 NETO2Q8NC67 525 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 APPL2Q8NEU8 664 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF483Q8TF39 744 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 EXOC4Q96A65 974 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC114Q96M63 670 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PPP1R10Q96QC0 940 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 PEBP4Q96S96 227 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 UNC93B1Q9H1C4 597 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SNX25Q9H3E2 840 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 HOMER3Q9NSC5 361 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 TMEM30AQ9NV96 361 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 COX16Q9P0S2 106 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 BLOC1S6Q9UL45 172 aa5.34□□□□□ -1.55
ATXN3-202ENST00000359366 MRPL42Q9Y6G3 142 aaKnown RBP5.34□□□□□ -1.55
ATXN3-202ENST00000359366 SIGLEC16A6NMB1 481 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 AGPSO00116 658 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms