RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 ATP5HO75947 161 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 C1QBPQ07021 282 aaKnown RBP23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 MGAT3Q09327 533 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 XKR4Q5GH76 650 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 ZNF296Q8WUU4 475 aaPredicted RBP23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 BTBD6Q96KE9 485 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 FAM210AQ96ND0 272 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 RUNDC3BQ96NL0 473 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 FAM124BQ9H5Z6 455 aaPredicted RBP23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 RNF19AQ9NV58 838 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 SAGE1Q9NXZ1 904 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 HMGXB4Q9UGU5 601 aa23.45■■□□□ 1.34
POLR2J2-202ENST00000358438 CABYRO75952 493 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 CD19P15391 556 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 GNAZP19086 355 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 COMTP21964 271 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 ACLYP53396 1101 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 IFI35P80217 286 aaPredicted RBP23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 INCA1Q0VD86 236 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 PTP4A2Q12974 167 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 ITGA7Q13683 1181 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 LIN9Q5TKA1 542 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 RNF43Q68DV7 783 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 SLC4A11Q8NBS3 891 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 TMEM35BQ8NCS4 154 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 FBF1Q8TES7 1133 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 SH3TC2Q8TF17 1288 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 PRCCQ92733 491 aaPredicted RBP23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 TWNKQ96RR1 684 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 TSPAN18Q96SJ8 248 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 ZNF518BQ9C0D4 1074 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 PRKAG3Q9UGI9 489 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 MIF4GDA9UHW6 222 aaKnown RBP23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 PPEF2O14830 753 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 KCNE1P15382 129 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 MMP8P22894 467 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 THPOP40225 353 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 NFX1Q12986 1120 aaKnown RBP23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 ZDHHC24Q6UX98 284 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 SPATA21Q7Z572 469 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 LRRC52Q8N7C0 313 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 ANAPC7Q9UJX3 599 aa23.44■■□□□ 1.34
POLR2J2-202ENST00000358438 TLDC2A0PJX2 215 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 TLR3O15455 904 aaKnown RBP23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 MED7O43513 233 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 FKTNO75072 461 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 FGGP02679 453 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 INHAP05111 366 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 ATP5DP30049 168 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 CDH5P33151 784 aaPredicted RBP23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 ORC1Q13415 861 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 SLC29A2Q14542 456 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 LLGL2Q6P1M3 1020 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 PHLDB2Q86SQ0 1253 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 ARRDC4Q8NCT1 418 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 GRAMD1AQ96CP6 724 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 TMEM176AQ96HP8 235 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 ELOVL4Q9GZR5 314 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 PAPOLBQ9NRJ5 636 aaKnown RBP23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 TXLNGQ9NUQ3 528 aa23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 BARX2Q9UMQ3 279 aaPredicted RBP23.43■■□□□ 1.34
POLR2J2-202ENST00000358438 RTN3O95197 1032 aaPredicted RBP23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 PTPN11Q06124 597 aaPredicted RBP23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 C9orf57Q5W0N0 161 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 TTC39CQ8N584 583 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 CHST12Q9NRB3 414 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 PODXLO00592 558 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 RASGRF2O14827 1237 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 CD4P01730 458 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 ATP6V1C1P21283 382 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 THEMIS2Q5TEJ8 643 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 DCAF12L1Q5VU92 463 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 GALNT15Q8N3T1 639 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 SLAIN1Q8ND83 568 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 ALG3Q92685 438 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 RNPEPL1Q9HAU8 725 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 MRPL47Q9HD33 250 aaKnown RBP23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 RPL26L1Q9UNX3 145 aaKnown RBP23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 SNX9Q9Y5X1 595 aa23.42■■□□□ 1.34
POLR2J2-202ENST00000358438 XPOTO43592 962 aaKnown RBP23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 MAMLD1Q13495 774 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 AUHQ13825 339 aaKnown RBP23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 ARHGEF6Q15052 776 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 PLEKHA7Q6IQ23 1121 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 JAMLQ86YT9 394 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 WDTC1Q8N5D0 677 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 UBL4BQ8N7F7 174 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 DYDC1Q8WWB3 177 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 CD101Q93033 1021 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 ITFG2Q969R8 447 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 LHX5Q9H2C1 402 aa23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 TRMT13Q9NUP7 481 aaKnown RBP23.41■■□□□ 1.34
POLR2J2-202ENST00000358438 GPR182O15218 404 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 SPOPO43791 374 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 AP1G2O75843 785 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 CALB2P22676 271 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 NDST1P52848 882 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 PTK7Q13308 1070 aa23.4■■□□□ 1.34
POLR2J2-202ENST00000358438 AGGF1Q8N302 714 aaeCLIP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms