RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 VCX3AQ9NNX9 186 aa24.73■■□□□ 1.55
NPAS3-203ENST00000357798 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 ZCCHC18P0CG32 403 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 BST1Q10588 318 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 DPYSL3Q14195 570 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 AAGABQ6PD74 315 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 TAB3Q8N5C8 712 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 DRAXINQ8NBI3 349 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 ATP6V0A1Q93050 837 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 DDX50Q9BQ39 737 aaKnown RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 THTPAQ9BU02 230 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 CCDC106Q9BWC9 280 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 POLR3FQ9H1D9 316 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 TMOD2Q9NZR1 351 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 GABBR1Q9UBS5 961 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 PLLPQ9Y342 182 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 KDELR1P24390 212 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 STIP1P31948 543 aaKnown RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 CDH5P33151 784 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-203ENST00000357798 MTM1Q13496 603 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 RAB3IL1Q8TBN0 382 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 APBB2Q92870 758 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 E2F7Q96AV8 911 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 MKS1Q9NXB0 559 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 TBC1D30Q9Y2I9 924 aa24.72■■□□□ 1.55
NPAS3-203ENST00000357798 YWHAGP61981 247 aaKnown RBP eCLIP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 HADHQ16836 314 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 LIN52Q52LA3 116 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 RASIP1Q5U651 963 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 C1orf146Q5VVC0 180 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 CDHR3Q6ZTQ4 885 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ARHGAP22Q7Z5H3 698 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 PRPF39Q86UA1 669 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 MTBPQ96DY7 904 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 OLFM3Q96PB7 478 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ZWILCHQ9H900 591 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ZDHHC7Q9NXF8 308 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 SIRPGQ9P1W8 387 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 KCNG1Q9UIX4 513 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ZNF180Q9UJW8 692 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 SIP14410 1827 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 TRIM49D1C9J1S8 452 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 PSMA2P25787 234 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 CCNFP41002 786 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 TMPRSS15P98073 1019 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 NCOA4Q13772 614 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ANGEL2Q5VTE6 544 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ACAD11Q709F0 780 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 ARID3BQ8IVW6 561 aaPredicted RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 TCP10L2B9ZVM9 353 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 BUD23O43709 281 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 LDHAP00338 332 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 PIGRP01833 764 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 EIF3EP60228 445 aaKnown RBP24.71■■□□□ 1.55
NPAS3-203ENST00000357798 KDSRQ06136 332 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 TEX44Q53QW1 395 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 WDR78Q5VTH9 848 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 SLFN12LQ6IEE8 588 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 FAM71DQ8N9W8 422 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 CLPTM1LQ96KA5 538 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 PPM1HQ9ULR3 514 aa24.71■■□□□ 1.55
NPAS3-203ENST00000357798 APOC4-APOC2K7ER74 178 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 STAM2O75886 525 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 KRT37O76014 449 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 APOC2P02655 101 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 SNRPAP09012 282 aaKnown RBP24.7■■□□□ 1.54
NPAS3-203ENST00000357798 BRD2P25440 801 aaKnown RBP24.7■■□□□ 1.54
NPAS3-203ENST00000357798 KCNN1Q92952 543 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 ACAP3Q96P50 834 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 TTC1Q99614 292 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 PDCD2LQ9BRP1 358 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 IMPG2Q9BZV3 1241 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 HAPLN2Q9GZV7 340 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 STK32BQ9NY57 414 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 MCF2LO15068 1137 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 WEE2P0C1S8 567 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 KCNJ11Q14654 390 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 SMTNL2Q2TAL5 461 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 ST13P4Q8IZP2 240 aaPredicted RBP24.7■■□□□ 1.54
NPAS3-203ENST00000357798 OR5B17Q8NGF7 314 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 EPAS1Q99814 870 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 SLC9A2Q9UBY0 812 aa24.7■■□□□ 1.54
NPAS3-203ENST00000357798 PDLIM1O00151 329 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 LRCH4O75427 683 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 BAG2O95816 211 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 EIF4BP23588 611 aaKnown RBP24.69■■□□□ 1.54
NPAS3-203ENST00000357798 IL1R2P27930 398 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 MDH1BQ5I0G3 518 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 GPAT2Q6NUI2 795 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 CRLF3Q8IUI8 442 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 WDTC1Q8N5D0 677 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 FAM151AQ8WW52 585 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 GLIS2Q9BZE0 524 aaPredicted RBP24.69■■□□□ 1.54
NPAS3-203ENST00000357798 PCDHGC3Q9UN70 934 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 TTLL3Q9Y4R7 772 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 CNTNAP2Q9UHC6 1331 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 C1QAP02745 245 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 SERPINA6P08185 405 aa24.69■■□□□ 1.54
NPAS3-203ENST00000357798 PIM1P11309 404 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms