RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KDELR1P24390 212 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 STIP1P31948 543 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 FKBP1AP62942 108 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 TMEM62Q0P6H9 643 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 MXD4Q14582 209 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 SLC45A4Q5BKX6 768 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DALRD3Q5D0E6 543 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 FAM47CQ5HY64 1035 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 WLSQ5T9L3 541 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PLEKHA7Q6IQ23 1121 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DPY19L2P1Q6NXN4 242 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 EFCAB12Q6NXP0 572 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 SLC39A4Q6P5W5 647 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.11□□□□□ -1.273e-7■□□□□ 8.1
RTN4-203ENST00000357376 FAM83AQ86UY5 434 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 CDKL3Q8IVW4 592 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 MAGEC3Q8TD91 643 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 HPDLQ96IR7 371 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 XPNPEP1Q9NQW7 623 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 COQ4Q9Y3A0 265 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PAPPAQ13219 1627 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 NPM3O75607 178 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 FAM155BO75949 473 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ASMTLO95671 621 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PGK2P07205 417 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 GMPSP49915 693 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 GDF10P55107 478 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 RPL10AP62906 217 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 PTPN11Q06124 597 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 BIRC2Q13490 618 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DPYSL3Q14195 570 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 LY6KQ17RY6 165 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 GOLGA7BQ2TAP0 167 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 FNBP1LQ5T0N5 605 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ISLR2Q6UXK2 745 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DENND5BQ6ZUT9 1274 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PID1Q7Z2X4 250 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 CLNKQ7Z7G1 428 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 BRSK2Q8IWQ3 736 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ST13P4Q8IZP2 240 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 RNF169Q8NCN4 708 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 SPDYE1Q8NFV5 336 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 SCG3Q8WXD2 468 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 INPP5DQ92835 1189 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 OTUD5Q96G74 571 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 OXNAD1Q96HP4 312 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 APOPT1Q96IL0 206 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 SYT11Q9BT88 431 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PORCNQ9H237 461 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 LRRC4Q9HBW1 653 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ARHGEF3Q9NR81 526 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 RNF19AQ9NV58 838 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ARL8BQ9NVJ2 186 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 PIM2Q9P1W9 311 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 TLK1Q9UKI8 766 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 SYNPO2Q9UMS6 1093 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 MYH7BA7E2Y1 1941 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ADCY3O60266 1144 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 C4BPAP04003 597 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 TXNP10599 105 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 LAMTOR4Q0VGL1 99 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 TMEM132DQ14C87 1099 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 SIX1Q15475 284 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 TRIP10Q15642 601 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 GLRA4Q5JXX5 417 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 FAM172AQ8WUF8 416 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DDX1Q92499 740 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 ZNF518BQ9C0D4 1074 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 DENND2DQ9H6A0 471 aaPredicted RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 CCDC134Q9H6E4 229 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 MAP3K20Q9NYL2 800 aaKnown RBP7.11□□□□□ -1.27
RTN4-203ENST00000357376 LGALS13Q9UHV8 139 aa7.11□□□□□ -1.27
RTN4-203ENST00000357376 GNAT1P11488 350 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 RBL1P28749 1068 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 IRX1P78414 480 aaPredicted RBP7.1□□□□□ -1.27
RTN4-203ENST00000357376 CDK16Q00536 496 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 CAPSQ13938 189 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 MMEL1Q495T6 779 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
RTN4-203ENST00000357376 PTPN20Q4JDL3 420 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 WASHC2DQ5SRD0 308 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 MAP3K21Q5TCX8 1036 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 IER5Q5VY09 327 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 C16orf46Q6P387 395 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 IZUMO2Q6UXV1 221 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 CATSPER4Q7RTX7 472 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 ACOT1Q86TX2 421 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 SCUBE1Q8IWY4 988 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 CCNYL1Q8N7R7 359 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 NETO2Q8NC67 525 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 AGBL3Q8NEM8 1001 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 CPB2Q96IY4 423 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 WNK4Q96J92 1243 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 LRMDAQ9H2I8 198 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 ST6GALNAC4Q9H4F1 302 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 ACSS3Q9H6R3 686 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 NENFQ9UMX5 172 aa7.1□□□□□ -1.27
RTN4-203ENST00000357376 DNAJC16Q9Y2G8 782 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms