RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 SLC35F6Q8N357 371 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 SPPL2BQ8TCT7 592 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 GPR152Q8TDT2 470 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 STK32AQ8WU08 396 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 NDRG1Q92597 394 aaKnown RBP25.34■■□□□ 1.65
CHKA-202ENST00000356135 TIFAQ96CG3 184 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 VCPIP1Q96JH7 1222 aa25.34■■□□□ 1.65
CHKA-202ENST00000356135 FSCN2O14926 492 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 CALB1P05937 261 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 GABRB2P47870 512 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 XYLT1Q86Y38 959 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 SLC35G2Q8TBE7 412 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 GDPD5Q8WTR4 605 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 CLEC4CQ8WTT0 213 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 HSFY1Q96LI6 401 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 AFF4Q9UHB7 1163 aaKnown RBP25.33■■□□□ 1.65
CHKA-202ENST00000356135 COG5Q9UP83 839 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 MYH10P35580 1976 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 CDH23Q9H251 3354 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 PDE4DIPQ5VU43 2346 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 GOLGA8SH3BPF8 625 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 HAPLN1P10915 354 aaPredicted RBP25.33■■□□□ 1.65
CHKA-202ENST00000356135 RPL34P49207 117 aaKnown RBP25.33■■□□□ 1.65
CHKA-202ENST00000356135 SMARCB1Q12824 385 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 OR6B2Q6IFH4 312 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 PPP1R2P3Q6NXS1 205 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 FAM183BPQ6ZVS7 135 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 PIWIL1Q96J94 861 aaKnown RBP25.33■■□□□ 1.65
CHKA-202ENST00000356135 IRAK3Q9Y616 596 aa25.33■■□□□ 1.65
CHKA-202ENST00000356135 PTPRDP23468 1912 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 PAPSS1O43252 624 aaPredicted RBP25.32■■□□□ 1.64
CHKA-202ENST00000356135 CYP1A2P05177 515 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 ATF2P15336 505 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 SMAD3P84022 425 aaKnown RBP25.32■■□□□ 1.64
CHKA-202ENST00000356135 ADIGQ0VDE8 80 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 LIN9Q5TKA1 542 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 VSTM1Q6UX27 236 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 IPO4Q8TEX9 1081 aaKnown RBP25.32■■□□□ 1.64
CHKA-202ENST00000356135 C2orf15Q8WU43 125 aaKnown RBP25.32■■□□□ 1.64
CHKA-202ENST00000356135 KCTD13Q8WZ19 329 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 CYP4F11Q9HBI6 524 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 LRRC4Q9HBW1 653 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 ABCB6Q9NP58 842 aa25.32■■□□□ 1.64
CHKA-202ENST00000356135 COLQQ9Y215 455 aaPredicted RBP25.32■■□□□ 1.64
CHKA-202ENST00000356135 KLRC2P26717 231 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 MAGEA11P43364 429 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 NOP2P46087 812 aaKnown RBP25.31■■□□□ 1.64
CHKA-202ENST00000356135 TKTL1P51854 596 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 MSANTD4Q8NCY6 345 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 SCAMP5Q8TAC9 235 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 TRIM11Q96F44 468 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 NUP85Q9BW27 656 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 UBXN6Q9BZV1 441 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 NGRNQ9NPE2 291 aaKnown RBP25.31■■□□□ 1.64
CHKA-202ENST00000356135 CTTNBP2NLQ9P2B4 639 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 TCRBV5S1A1TA0A578 114 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 TGM5O43548 720 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 MOCS3O95396 460 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 MYBL1P10243 752 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 NAP1L1P55209 391 aaKnown RBP25.31■■□□□ 1.64
CHKA-202ENST00000356135 CREMQ03060 361 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 IFRD2Q12894 506 aaPredicted RBP25.31■■□□□ 1.64
CHKA-202ENST00000356135 MAMLD1Q13495 774 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 TAF5Q15542 800 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 TPGS2Q68CL5 300 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 EMILIN2Q9BXX0 1053 aa25.31■■□□□ 1.64
CHKA-202ENST00000356135 BTNL10A8MVZ5 291 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 GTF2F1P35269 517 aaKnown RBP eCLIP25.3■■□□□ 1.641e-7■■■■□ 22.2
CHKA-202ENST00000356135 ACADSBP45954 432 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 ZNF268Q14587 947 aaPredicted RBP25.3■■□□□ 1.64
CHKA-202ENST00000356135 RAB41Q5JT25 222 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 PLEKHA7Q6IQ23 1121 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 RNF10Q8N5U6 811 aaKnown RBP25.3■■□□□ 1.64
CHKA-202ENST00000356135 GIPC2Q8TF65 315 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 RFFLQ8WZ73 363 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 BTBD6Q96KE9 485 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 C8orf48Q96LL4 319 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 TRIM7Q9C029 511 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 STRIP2Q9ULQ0 834 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 NCANO14594 1321 aa25.3■■□□□ 1.64
CHKA-202ENST00000356135 CTAGE9A4FU28 777 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 TNFRSF10BO14763 440 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 TRIM66O15016 1216 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 MCRS1Q96EZ8 462 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 NAPGQ99747 312 aaPredicted RBP25.29■■□□□ 1.64
CHKA-202ENST00000356135 ULBP1Q9BZM6 244 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 CYLDQ9NQC7 956 aa25.29■■□□□ 1.64
CHKA-202ENST00000356135 AVENQ9NQS1 362 aaPredicted RBP25.29■■□□□ 1.64
CHKA-202ENST00000356135 PER2O15055 1255 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 GRAP2O75791 330 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 ADH1AP07327 375 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 USP17L7P0C7H9 530 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 ATF6P18850 670 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 SLC5A3P53794 718 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 RPL7AP62424 266 aaKnown RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 DNAJC24Q6P3W2 148 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 LILRA6Q6PI73 481 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 OLFML1Q6UWY5 402 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 SIX6OS1Q8N1H7 587 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 TRIM58Q8NG06 486 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms