RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 TRIM72Q6ZMU5 477 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 SUSD6Q92537 303 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 DNAJC7Q99615 494 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 AGPAT1Q99943 283 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 THEGQ9P2T0 379 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 IMPACTQ9P2X3 320 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 USP15Q9Y4E8 981 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-201ENST00000356017 PTPRDP23468 1912 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 GOLGA6L6A8MZA4 724 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 SERPING1P05155 500 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 CFHP08603 1231 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 CDC25CP30307 473 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-201ENST00000356017 KIF11P52732 1056 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 MTMR3Q13615 1198 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 PMF1Q6P1K2 205 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 SLC20A1Q8WUM9 679 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 GCNAQ96QF7 691 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 LRRC3Q9BY71 257 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 HAUS4Q9H6D7 363 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 ABHD10Q9NUJ1 306 aa16.39■□□□□ 0.21
TRIM13-201ENST00000356017 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 MBTPS2O43462 519 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 MYL4P12829 197 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
TRIM13-201ENST00000356017 FMO1Q01740 532 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 E4F1Q66K89 784 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-201ENST00000356017 TMC8Q8IU68 726 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 GPIHBP1Q8IV16 184 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 PDZD8Q8NEN9 1154 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 OVCA2Q8WZ82 227 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 ANP32BQ92688 251 aaKnown RBP16.38■□□□□ 0.21
TRIM13-201ENST00000356017 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 CLUHO75153 1309 aa16.38■□□□□ 0.21
TRIM13-201ENST00000356017 TULP2O00295 520 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 CHRNB2P17787 502 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TNFAIP3P21580 790 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 FSHRP23945 695 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 GABRR2P28476 465 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 RPL34P49207 117 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TKTL1P51854 596 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 USP46P62068 366 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 IFRD2Q12894 506 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 PDCLQ13371 301 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 GPRIN1Q7Z2K8 1008 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 WDTC1Q8N5D0 677 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 MSANTD4Q8NCY6 345 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 STKLD1Q8NE28 680 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 FBXO32Q969P5 355 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SLC4A5Q9BY07 1137 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 MIS12Q9H081 205 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 ZNF334Q9HCZ1 680 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.37■□□□□ 0.211e-8■■■■■ 29.9
TRIM13-201ENST00000356017 ZMYM5Q9UJ78 669 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SCML2Q9UQR0 700 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 MRPS23Q9Y3D9 190 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 REV3LO60673 3130 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 NCANO14594 1321 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 GRXCR2A6NFK2 248 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 FBXO21O94952 628 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 ZBED1O96006 694 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 CYP1A1P04798 512 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 RGS7P49802 495 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TAF10Q12962 218 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SMAD2Q15796 467 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 HGSNATQ68CP4 663 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 PTCRAQ6ISU1 281 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 PPP1R2P3Q6NXS1 205 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SCML4Q8N228 414 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 C1orf131Q8NDD1 294 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 FEZF2Q8TBJ5 459 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
TRIM13-201ENST00000356017 PPP1R13BQ96KQ4 1090 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 SYT11Q9BT88 431 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 ATXN3LQ9H3M9 355 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 CNGB3Q9NQW8 809 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 PRDM6Q9NQX0 595 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 TRPM5Q9NZQ8 1165 aa16.37■□□□□ 0.21
TRIM13-201ENST00000356017 EYSQ5T1H1 3165 aa16.36■□□□□ 0.21
TRIM13-201ENST00000356017 SOBPA7XYQ1 873 aa16.36■□□□□ 0.21
TRIM13-201ENST00000356017 SART1O43290 800 aaKnown RBP16.36■□□□□ 0.21
TRIM13-201ENST00000356017 F11P03951 625 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms